Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g02247 ATGGGATCACAAGTTGGGGCAGTCCAAGAGCCAAAGACTGTACCTTTGTCAAGGCAAGGGTCCCTGTATAATCTGACCCTTGATGAAGTGCAGAACCAGCTTGGAAATTTGGGGAAACCACTTGGCAGCATGAATCTGGATGAGCTGCTTAAGAGTGTGTGGAGTGCTGAAGCTGGTGAGGCCTCTGGATTGGATTTTGGTGGTGATGCTAACATGCAGCATAGTCAGCTTGCTTCTGGGTACTCTCTGAATCCACAGGGGAGCCTAACTTTGACTGGGGATCTCAGCAAAAAAACTGTTGATGAGGTTTGGAGAGACTTGCAACTGAAGAAGAGCAATATTAGGGATAGGAAAGCCCATGAAAGAGAAAGACAGCCTACACTGGGTGAGATGACCCTGGAGGATTTTTTGGTGAAGGCTGGAGTGGTTGCTGAATCTTTTCCTACCAAGGATGGTGCCATGTCAGGGGTTGATTCAAATGGGGATTCCCAACAAAATGTTTCACAACATATCCATTGGATGCAATACCAGCTCCCTTCAGTGCAGCAGCCTCCACAGCATCAACATCAAAATCATCAGAATAATATGATGGGGGGTTTTGTGGCTGGCCATGCCATTCAACAGCCTTTCCAGGTTGCAGTGAATCCAGTTTTGGATGCAGCAGTGTCACCATCTTCTTTATTGGGTACATTATCAGATACACAAACTCTAGGTCGGAAAAGGGTTGCCTCTGGTCATGTGGTAGAGAAAACTGTAGAGAGGAGGCAAAAGAGGATGATTAAAAATAGGGAATCTGCAGCTCGGTCACGGGCAAGAAAACAGGCTTACACACAAGAACTGGAGATTAAAGTTTCACGTTTAGAAGAGGAGAATGAAAGACTTAAGAGACAGAGTGACTTTGACCTTCCTTTGCTTACGTGGAAGTATACAGGAGATATGATGGTTTCATATGTTGAAGTTCATAATGTACATGGACTAAGACAGCCAGACAATCTAGTTTGGACTTCAGTACGGTTGTGGCTTCTAGGAGATTTGTCCAATGGTCCAACCATGTTATGTGCAGTTTGGCTTATTGAAACATTTCAAGTCAACTCTATAAGAATCAATGTACCACAAAAAAAGGATGATAATAAATCGCGGGCCCAGATTGAGTACGCTGGGAAAGCCATGGAACCAGGTAGATTGCACTGGGAAGCCGTGGGCACACTGGAAAGATGCACGGCGGAGGAGATTGAAAACAAAATGGAACATAAATGTTTGGACTTGTTGGAGATAGAGAAGGTGTTGCCAACTGTGCCACCACCTGAGCCTAAGCATCAGCTTCGCAGAACAAGTTCAGCATCCTTTTGA 1350 0.4511 MGSQVGAVQEPKTVPLSRQGSLYNLTLDEVQNQLGNLGKPLGSMNLDELLKSVWSAEAGEASGLDFGGDANMQHSQLASGYSLNPQGSLTLTGDLSKKTVDEVWRDLQLKKSNIRDRKAHERERQPTLGEMTLEDFLVKAGVVAESFPTKDGAMSGVDSNGDSQQNVSQHIHWMQYQLPSVQQPPQHQHQNHQNNMMGGFVAGHAIQQPFQVAVNPVLDAAVSPSSLLGTLSDTQTLGRKRVASGHVVEKTVERRQKRMIKNRESAARSRARKQAYTQELEIKVSRLEEENERLKRQSDFDLPLLTWKYTGDMMVSYVEVHNVHGLRQPDNLVWTSVRLWLLGDLSNGPTMLCAVWLIETFQVNSIRINVPQKKDDNKSRAQIEYAGKAMEPGRLHWEAVGTLERCTAEEIENKMEHKCLDLLEIEKVLPTVPPPEPKHQLRRTSSASF. 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g02247 449 Gene3D - 252 300 - -
Seca10g02247 449 SUPERFAMILY Leucine zipper domain 254 299 IPR046347 GO:0003700|GO:0006355
Seca10g02247 449 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 252 306 - -
Seca10g02247 449 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 16 313 IPR043452 GO:0003700|GO:0045893
Seca10g02247 449 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 252 297 IPR004827 GO:0003700|GO:0006355
Seca10g02247 449 SMART brlzneu 250 315 IPR004827 GO:0003700|GO:0006355
Seca10g02247 449 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 257 272 IPR004827 GO:0003700|GO:0006355
Seca10g02247 449 CDD bZIP_plant_BZIP46 254 297 - -
Seca10g02247 449 Coils Coil 270 297 - -
Seca10g02247 449 Pfam bZIP transcription factor 254 296 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g02247 Seca-Chr10 26125658 26131085 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g02247 424 449 bZIP Transcription Factor Family AT3G56850 76.923 3.94e-07 49.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Seca10g02247 bZIP_1 1.5e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g02247 K14432 - gmx:100170741 405.601