Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g02222 ATGGAAGAAGATCAGCATCAACAACACCAACAACAGGTTAAGTCTGAGTCTGAGTCTCAGGATCACACCCCAAATAGTCCAAACCAAAGCACTGAGAGGAGTGAACCCGTGAGGTCAAGATGGACTCCAAAACCAGAACAAATCCTCATACTTGAGTCCATCTTCAACAGTGGTATGGTTAACCCACCAAAAGATGAAACTGTCAGAATAAGAAAACTTCTTGAGAAATTTGGAACCGTTGGTGATGCCAACGTCTTCTACTGGTTCCAGAACCGCCGTTCACGCTCCCGCCGCCGCCAGAGGCAGATGCAGGCCGCAGCTCTTGGCGGTGCAAATGTGAACAACAATATGAACAGCTCTGCTAATTCTTCTGCTGCTGCTACTTCTGCTATGGGTTTTGGTGGTTCTACTTACCTTTCTGCTCTTAATTCTGCTCATGCATCTTTCCTTGCTGCTGGTTTACCTTCATCATGTGGTGGTGTTGGTGGTGGCCAAGAAGGGTTGAGTGGTTTCTTCTCAGGTGGCTCAACTCATCAAATGGGGTTCCCTCAAATTGATCACACCTCAGCTTCTGCATCATCAGTTTTGTACCCTTCTGATGCACCAAATTTAAGCTTTCAAACTGGGGTAGGATTTGGAGCAGGGACTAATATCTCAGGATTCATCACAGTGTTCATCAATGGGATTGCAACAGAAGTTCCAAGGGGCCCATTGGACCTCAAGACAGTGTTTGGTGAAAATGTAATGTTAGTTCATTCCTCTGGAGGGTCAGTTCCCACCAATGAATTTGGCTTCTTGATGCAGAGCTTGCAGCATGGTGAAAGCTACTATCTGGTTTCAAAGCAACCCCAAGTATGA 858 0.4615 MEEDQHQQHQQQVKSESESQDHTPNSPNQSTERSEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGTVGDANVFYWFQNRRSRSRRRQRQMQAAALGGANVNNNMNSSANSSAAATSAMGFGGSTYLSALNSAHASFLAAGLPSSCGGVGGGQEGLSGFFSGGSTHQMGFPQIDHTSASASSVLYPSDAPNLSFQTGVGFGAGTNISGFITVFINGIATEVPRGPLDLKTVFGENVMLVHSSGGSVPTNEFGFLMQSLQHGESYYLVSKQPQV. 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g02222 285 Pfam Homeodomain 38 98 IPR001356 GO:0003677
Seca10g02222 285 MobiDBLite consensus disorder prediction 12 36 - -
Seca10g02222 285 FunFam WUSCHEL-related homeobox 11 38 105 - -
Seca10g02222 285 SUPERFAMILY Homeodomain-like 33 107 IPR009057 -
Seca10g02222 285 MobiDBLite consensus disorder prediction 1 43 - -
Seca10g02222 285 PANTHER WUSCHEL-RELATED HOMEOBOX 11 18 282 IPR044558 GO:0003700|GO:0048830
Seca10g02222 285 SMART HOX_1 36 103 IPR001356 GO:0003677
Seca10g02222 285 Gene3D - 38 105 - -
Seca10g02222 285 ProSiteProfiles 'Homeobox' domain profile. 34 99 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g02222 Seca-Chr10 25597709 25599815 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g02222 20 285 Wox Gene Family AT3G03660 49.301 1.02e-66 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Seca10g02222 Homeodomain 1.2e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g02222 - - lang:109335690 291.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g02222 10 25597709 25599815 Seca10g02222 10 25597709 25599815 ECH