Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g02218 ATGGAGGAGTTTGAAGCGGACGTGGAGACACACAAGAATGAGGAGGCATTGAAGGAGCTGAAGTGGCTTGTGAAGGAGTTGCAGCAGGAAGAAGATTTGGCGAAGCGGCGAGAGGTTGCGGCCACTGTGAAGTTTCTCACGAAGGAGAACTTGGAAGTGAGAGGAATGCTCGCAATGCTTAGAGCCATTCCTCCTCTTGTTGTAATTCTCGATTTGGAAGACCTTGATTCTCAAATCGCTTCACTATATATGTTGCTCAATCTCGAAATTGGAAACGATGCAAATATAGCATCCTTTGTAAACGTTGGCTTTATTCACAAGATGATCAATCTCATTGAATCTCCAGATGGTCCAGATTCGAGTGCGGTGAACGTGGAGTTCATCTTTGACCCTGGTGGAGTTAATCTATGTCTCTTGGTTGTTTTCTTGGCTACGATATATTTTCTTTCTTTGCTGTAA 459 0.4401 MEEFEADVETHKNEEALKELKWLVKELQQEEDLAKRREVAATVKFLTKENLEVRGMLAMLRAIPPLVVILDLEDLDSQIASLYMLLNLEIGNDANIASFVNVGFIHKMINLIESPDGPDSSAVNVEFIFDPGGVNLCLLVVFLATIYFLSLL. 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g02218 152 Gene3D - 18 131 IPR011989 -
Seca10g02218 152 SUPERFAMILY ARM repeat 17 116 IPR016024 -
Seca10g02218 152 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 7 121 - -
Seca10g02218 152 Coils Coil 1 37 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g02218 Seca-Chr10 25507989 25508447 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g02218 9 125 U-box Gene Family AT2G23140 30.833 1.49e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g02218 - - psat:127098188 150.984