Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g02210 ATGGCTATCACAGTTTCTGTGTCCAACAAACACATGGGTTACACCTTGTTCTTGAACATCTCCTTCCTCCTGGTGATTTCTGCTTTCATGATTATTCACTTCCACACTCCAGAAATTGTTGTGGTTGTGAAGAGGAACGAATCTGCTTTTGATGATGATGGCAGTGGTGAACAGGACTGCAAGAGGTTGGACAACCTTGGTGACTACAAAGCCAAGTGCATATACCTGAAATCCCATGACCCATGTGTCTCTCAGGGCTACATTGATTACCTTTACCTTTTTCATTGTAAATTTGGGAGATTCCCTCTATTGGGTTACAGTCTCTTGTTTCTTTGGCTCCTAGTTCTGTTTTATTTGTTGGCTAATACAACTTCTGAATATTTTTGTCCTTCTCTTGAAAATTTGTCCAAATTGCTGAGATTGTCCCCTACAATTGCTGGAGTCACCCTCCTCTCTCTTGGCAATGGTGCCTGTGACGTTTTCTCCAGCCTTGTATCTTTCCAGGGAAGTGGGACCCGTAGCATTGGCTTGAACACGGTTCTTGGGGGTGTTTCTTTTGTGTCCTGTGTTGTGGTGGGGATAGTGAGCATTTCAATACGGCACAAGGGGGTTCAGGTTATGAAATCAGCTTTTGTAAGAGATGTTTGTTTTCTCCTTTTGGTTCTTATGTGCTTGTTTTGTATTTTGATTACTGGTGAGATCAATGTTTTTGGAGCAATTGGTTTTTCTTTGATATATGGGGTGTATGTAATTGTTGTTTATGTCTCTTCTACTAGATGGAAGGATGGGGGTGTTGATGATGCTGAAAGGGATGATATTTCAAGTTATGGCGATGACTTGAGTTTGACTGTGCCTCTTCTCAGTAGTATGAGGAAAGGACAGATTGATTGTGTTGAAAGTTGTCCTCAAGAATGTGACTTGAATATCAAGAAGAATTGCTGCTGCATGAGATCTTCAGTATGTAGAATGTCACTTTATGTTCTGGAGATGCCCCTTTACTTGCCTAGGAGATTGACAATTCCTGTTGTCTGTGAAGAGAGATGGTCAAAGCTGTATGCAGTTTTTTCAGTGATATTAGCACCAATTCTCTTGTCTGTCCTGTGGGACCCTCATGAAGGCTTCAGCACAAACCTTATTGTTTATGGAATTGGATTCTTGGTTGGAATGATTCTTGGTGTAGCTGCACTTTTCACAACTGAAATGTCAAGGCCACCAAAGAAGTGCTTATTTCCTTGGCTTGCTGGAGGGTTTGTAATGAGTGTGACCTGGAGCTACATCATAGCTCAAGAGTTGGTGGGTTTGCTGGTTTCAATTGGCTACATATGTGGAATAAGTCCTTCAATTCTTGGGTTAACAGTTCTTGCTTGGGGGAACTCACTCGGGGATTTGATGACAAATTTAACCATGGCTTTAAATGGTGGACCAGAGGGTGCTCAAATTGCAATATCAGGCTGCTATGCTGGTCCTATCTTCAATACTCTAGTTGGATTAGGCTTGTCTCTTGTAACTTGTACATGGTCAGAGTACCCACAATCTATTGTGATCCCCAGAGATCCATATCTTTGGGAGACATTAGTATTTCTGGTGATTGGATTAGTTTGGGCACTTGTGGTTTTGATAAAAAGAGATATGAAGCTTGATGGACTCTTAGGAGGAGGGCTTTTAGTTGTTTACTTCATTTCTCTGTTTCTGAGGTTGATTCAGACACAAGGGTATCTCCAATTTAATGATTTGAAAAGCTTAGATTCTTAG 1752 0.4127 MAITVSVSNKHMGYTLFLNISFLLVISAFMIIHFHTPEIVVVVKRNESAFDDDGSGEQDCKRLDNLGDYKAKCIYLKSHDPCVSQGYIDYLYLFHCKFGRFPLLGYSLLFLWLLVLFYLLANTTSEYFCPSLENLSKLLRLSPTIAGVTLLSLGNGACDVFSSLVSFQGSGTRSIGLNTVLGGVSFVSCVVVGIVSISIRHKGVQVMKSAFVRDVCFLLLVLMCLFCILITGEINVFGAIGFSLIYGVYVIVVYVSSTRWKDGGVDDAERDDISSYGDDLSLTVPLLSSMRKGQIDCVESCPQECDLNIKKNCCCMRSSVCRMSLYVLEMPLYLPRRLTIPVVCEERWSKLYAVFSVILAPILLSVLWDPHEGFSTNLIVYGIGFLVGMILGVAALFTTEMSRPPKKCLFPWLAGGFVMSVTWSYIIAQELVGLLVSIGYICGISPSILGLTVLAWGNSLGDLMTNLTMALNGGPEGAQIAISGCYAGPIFNTLVGLGLSLVTCTWSEYPQSIVIPRDPYLWETLVFLVIGLVWALVVLIKRDMKLDGLLGGGLLVVYFISLFLRLIQTQGYLQFNDLKSLDS. 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g02210 583 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 18 573 - -
Seca10g02210 583 Pfam Sodium/calcium exchanger protein 413 565 IPR004837 GO:0016020|GO:0055085
Seca10g02210 583 Pfam Sodium/calcium exchanger protein 110 254 IPR004837 GO:0016020|GO:0055085
Seca10g02210 583 Gene3D - 349 566 IPR044880 -
Seca10g02210 583 Gene3D - 141 269 IPR044880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g02210 Seca-Chr10 25367483 25369234 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g02210 6 571 Antiporters AT5G17850 53.065 2.79e-169 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g02210 K13754 - gmx:100813848 796.964