Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g02188 ATGTTTAATTTTATTATAATTGTGGATATAAGATGCAAAGGTTTCAAGGGTGCACAACCTGGTCTAGTTCTCTCATGGGCTCAAAGAGTTAAAATTGTTGTTGGTGCAGCTAGAGGACTTGAATATCTTCATGAAAAGGCAGAGACTCATATTATCCTTCGTTACATTAAGTCTAGTAACATAATGCTTTTCGATGATGATGTTGCAAAGATTGCTGATTTTGATTTGCCAAATCAAGCCCCTGATGCAGCAGCACACACGACTTCATTCTACCCGTGTTCTTGGAACCTTTGGTTATCATGCTCCAGAGTAACTTGCTACGGAAGAACGATGAGAAGAAGACAAGAAGAAAGGAGAGAAGAAGAAACCGTCAGAAGCGAGAATGAGGGGAATGCAATTAGGGTTCAACAAATTCCCCTTTAA 423 0.3948 MFNFIIIVDIRCKGFKGAQPGLVLSWAQRVKIVVGAARGLEYLHEKAETHIILRYIKSSNIMLFDDDVAKIADFDLPNQAPDAAAHTTSFYPCSWNLWLSCSRVTCYGRTMRRRQEERREEETVRSENEGNAIRVQQIPL. 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g02188 140 Pfam Protein kinase domain 25 84 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca10g02188 140 Gene3D Transferase(Phosphotransferase) domain 1 15 107 - -
Seca10g02188 140 ProSiteProfiles Protein kinase domain profile. 1 140 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca10g02188 140 SUPERFAMILY Protein kinase-like (PK-like) 20 87 IPR011009 -
Seca10g02188 140 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 12 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g02188 Seca-Chr10 25070562 25070984 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g02188 23 89 Trihelix Transcription Factor Family AT1G68690 55.224 1.59e-15 70.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Seca10g02188 Pkinase 8e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g02188 K13436 - gmx:547595 131.724