Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g02175 ATGGCCTCTCCTTATTCTTTGCTTTTGATTTCTTGCCTTGTAGTAGTATTGGATTCCTCGTCCCACTTTCAAGTATCAGAGGCACAAGCCCTTCCTCCAGTAGTGAAGGGACTGTCCTTTTCATTTTTTTCCAAGACATGTCCTCAGCTTGAAAACATCGTCAGAAATCATCTCAAGAAGGTGTTCAAGCAGGACAATGGCCAAGCTCCCGGTTTACTCCGTATCTTCTTCCATGACTGCTTTGTCCAAGGATGCGATGGATCGTTGTTGTTGGATGGGAATCCAGGGGAAAGGGATCAAATAGCAAACGGAGGGATGAGGACAGAGGCATTGAAGACCATAGATGACCTGCGAGGTCTTGTTCACAAGGCCTGTGGTAACATTGTCTCCTGTGCTGACATCACTGTCTTGGCAGCTCGTGATGCTGTTTTCCTTTCTGGTGGACCTGATTTTGCAGTGCCACTAGGAAGAAAGGATGGTGTAACCTTTAACATAGAAGGAACAAACAAGCTTCCATCTCCTTTTAGCAACACAACTCAAACCATCAAAACTTTTGCTGAAAAAAACTTTGATGTCATAGATGTGGTAGCATTCTCAGGTGCACATACTTTTGGCCGTGCACATTGTGGCTCATTCTTCAACAGGCTTTCCCCTGTTGACCCTACCATGGACAAAACCTTAGCACAAAATCTCAAGGCCACTTGCCCTGACAGAAACTCACAGAACACTGCCAATTTGGACATCAGAACCCCAACAGTGTTTGATAATAAGTATTATATTGATCTAATGAACCGTCAAGGTGTGTTCACTTCAGATCAGGACTTGCTCAATGATCAGAGGACTAAAGGATTAGTTAACTCCTTTGCCAATGACCAGAACCTGTTTTTCCAAAAGTTTGTGAGTGCTGTGATAAAGTTGAGCCAATTGGATGTGTTGACAGGGAATCAAGGTGAAATTCGTGCAAAGTGCAATGTGATTAACAAGAAGAAATCTGTGTTGACATCTGTGGTGGAAGAGGTGGTAGAATTCACTAATCAGTTCTAA 1044 0.4339 MASPYSLLLISCLVVVLDSSSHFQVSEAQALPPVVKGLSFSFFSKTCPQLENIVRNHLKKVFKQDNGQAPGLLRIFFHDCFVQGCDGSLLLDGNPGERDQIANGGMRTEALKTIDDLRGLVHKACGNIVSCADITVLAARDAVFLSGGPDFAVPLGRKDGVTFNIEGTNKLPSPFSNTTQTIKTFAEKNFDVIDVVAFSGAHTFGRAHCGSFFNRLSPVDPTMDKTLAQNLKATCPDRNSQNTANLDIRTPTVFDNKYYIDLMNRQGVFTSDQDLLNDQRTKGLVNSFANDQNLFFQKFVSAVIKLSQLDVLTGNQGEIRAKCNVINKKKSVLTSVVEEVVEFTNQF. 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g02175 347 PRINTS Plant peroxidase signature 147 162 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g02175 347 PRINTS Plant peroxidase signature 301 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g02175 347 PRINTS Plant peroxidase signature 71 91 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g02175 347 PRINTS Plant peroxidase signature 193 205 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g02175 347 PRINTS Plant peroxidase signature 245 260 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g02175 347 PRINTS Plant peroxidase signature 261 278 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g02175 347 PRINTS Plant peroxidase signature 128 138 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g02175 347 PRINTS Plant peroxidase signature 47 66 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g02175 347 ProSitePatterns Peroxidases active site signature. 69 80 IPR019794 GO:0004601
Seca10g02175 347 Gene3D Peroxidase, domain 2 173 307 - -
Seca10g02175 347 FunFam Peroxidase 41 184 - -
Seca10g02175 347 CDD secretory_peroxidase 37 326 IPR033905 GO:0004601|GO:0042744
Seca10g02175 347 SUPERFAMILY Heme-dependent peroxidases 32 327 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca10g02175 347 Pfam Peroxidase 54 291 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca10g02175 347 Gene3D - 42 324 - -
Seca10g02175 347 ProSiteProfiles Plant heme peroxidase family profile. 37 327 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca10g02175 347 FunFam Peroxidase 172 306 - -
Seca10g02175 347 PANTHER - 24 327 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g02175 347 PRINTS Haem peroxidase superfamily signature 129 146 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca10g02175 347 PRINTS Haem peroxidase superfamily signature 69 83 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca10g02175 347 PRINTS Haem peroxidase superfamily signature 147 159 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca10g02175 347 PRINTS Haem peroxidase superfamily signature 247 262 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca10g02175 347 PRINTS Haem peroxidase superfamily signature 194 209 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g02175 Seca-Chr10 24928472 24932102 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g02175 7 342 Peroxidase AT1G71695 54.386 1.75e-129 373
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g02175 K00430 - gmx:547550 524.628