Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g02172 ATGGCAGTAAGCATTACATCTTCTCACACTGTCATTCCCTCCCACACTACTCCAAATGATACTGTTTTACTGTCTGAGAGTGAACAAATCAATGCTCACAATCATGCATTCACCATCTACATCTATAGGCCAAATCACAACCCCACTTTCAAAATTATTGTGGACACAATCAGACACTCTCTTAGCAACATCTTAGTCCACTACTACCCTCTAGCTGGCAGGTTACACATCACAAGGGGTGGAAGATGGGAATTGGAGTGCAATGCAAAGGGTGTGAAGCTGTTGGAAGCTCAATCCACAAAAACACTTGATGAGTATGGTGACTTTGAACCTAATGACACCATCACAGAGCTTATTCCTAAGGTTGATTATAGTGAACCTTTGGAGAATTTACCACTGTTATTTGTGCAGTTAACAAAATTCACCTGTGGTGGTTTCTGTGTTGGCATTGCCATTTCCAATGTCTTAGTTGATGGAATTTCTGGCACTCTCTTTGTTGATGCATGGGCTAAGGTTGCTCGAGGTGGTACCTTGGAGGATTCTGAGATGCCACTTCTGAACAGAACAGTTCTGAGATCAGAGACAAACTTCAACATGGCATCACCATGCTTTCACCATCCAGAGTTCAAGCCATTGCCACTTGTCCTAGGCGACACTGATGCCATGGTGGAGCGTGAGAAAGAGACAACTCTTGCAATACTCAAACTCACAAAGGATATGGTGGAGAAGCTGAGGAAGAAAGCCAATGAGTTTATGGAAGATGACAATCAGAGTCTGGGGAAGAGGGGAAGAAGACCTTATAGCAGATATGAGAGCATTGGTGCTCATATATGGAGGTGTGCATGCAAGGCTCGCTTTGGTGATCACAATCAACCAACGGTGGTTTACATTGTTGCAGGTACCAGAAACAGATTGAAGCCACCTCTTCCTTCAAACTACTTTGGAAATGCCACACATCCAAGTGTAACACCAACATCCTTCAGTGGGGACATTGTGTCAAAGCCTTTGAGCTATGGGGCACAAAAGATTAGGGAAGCAATTGAAGTGTTAACAGATGAGTATTTGAGATCAGCGTTTGATTTTATTGGGAGTCAGAAAAATGTTGGGTGGCTAAGGCCATCCTTGAATAATGAAGGGATTGTGGAAGCCCCTTTTCTTGGGAATCCTAATCTTAACATATGGAGTTGGATAAGTAATATGCCAATGTATGGACCAGATTTTGGATGGGGAAAGCCTATATATATGGGCCCTGGTGCTGTGAAAGGAGATGGCAAGGCATTCATTATGCCAGGTCCATTAGATGATGGGTCTCTTTCCATAGCCATTCGTTTGCAAACTTCTCATATGGAAGTTTTCAAGGAGTACTTCTACAAGGACATATGA 1383 0.4309 MAVSITSSHTVIPSHTTPNDTVLLSESEQINAHNHAFTIYIYRPNHNPTFKIIVDTIRHSLSNILVHYYPLAGRLHITRGGRWELECNAKGVKLLEAQSTKTLDEYGDFEPNDTITELIPKVDYSEPLENLPLLFVQLTKFTCGGFCVGIAISNVLVDGISGTLFVDAWAKVARGGTLEDSEMPLLNRTVLRSETNFNMASPCFHHPEFKPLPLVLGDTDAMVEREKETTLAILKLTKDMVEKLRKKANEFMEDDNQSLGKRGRRPYSRYESIGAHIWRCACKARFGDHNQPTVVYIVAGTRNRLKPPLPSNYFGNATHPSVTPTSFSGDIVSKPLSYGAQKIREAIEVLTDEYLRSAFDFIGSQKNVGWLRPSLNNEGIVEAPFLGNPNLNIWSWISNMPMYGPDFGWGKPIYMGPGAVKGDGKAFIMPGPLDDGSLSIAIRLQTSHMEVFKEYFYKDI. 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g02172 460 Gene3D - 1 211 IPR023213 -
Seca10g02172 460 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 11 456 - -
Seca10g02172 460 Gene3D - 218 458 IPR023213 -
Seca10g02172 460 Pfam Transferase family 1 458 - -
Seca10g02172 460 Coils Coil 234 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g02172 Seca-Chr10 24860937 24863406 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g02172 1 458 Monolignol Biosynthesis Gene Families AT5G48930 36.245 3.42e-101 307
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g02172 K13065 - gmx:100779652 625.935