Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g02144 ATGGAGGTGCAAACTCCACCACAACCCACTCCTCCGCCGCCCCATCTCACCTTCCCTGACTCCGCCAACTCCTCCCCTCGCTCGCGGAACACCGATTCCTGGGATGAGCCACACCCTCCCTCAACCACCACCACCACCAAGCTCCGCCTCATGTGCAGCTATGGCGGCCAAATTGTCCCTCGCCCCCACGACAAGTCCCTCTGTTACGTCGGCGGCGACACCCGCATCGTGGTGGTGGACCGCCAAACCTCACTCTCCGACCTCTCCACGCGCCTCTCCAAATCCTTCCTTAACGGCCTTCCCTTCCTTCTTAAGTATCAGCTCCCAAACGAAGATCTCGATTCCCTTGTTTCCGTTACCACCGACGAAGACCTCGAAAACATGATCGACGAGTACGATCACCGAACCTCCTCCAAACCTTCCAGAATTCGTCTCTTCCTCTTCCCGGCCCAGCCCGACTTGGTCCAGACGGTTGGGCCTGGAACGGGCCCAGTAACGGCCAAGACAGAGGACTGGTTCCTCAACGCGCTGAACGGCGCCGGGGGCCTGTCGGACTCCGGCTCGATGAATGGCCTCCTTGGACTCGACGACGAGGAGGCTGTTGCTGCCGGCGTCGTGAACAACAACCTAACGCCGACGCAGCACAAGAATTTGAAGCAGGGGCAGGAGGTTCAATCCGTGCCGGATTCGCCGATGCTGGAGACGAATTCGTCTTTCGGGTCTACTTCATCGTCGCCGTCGGTGGCGAATTTGCCGCCGATAAAGGTTCGTGTGGAGGATGGCGGTAACGGTGGTGGTGAAATTAGGGCGCAGGATCAGAAGGTGGTGGGAATTGAGGAACAGTTTGCTCAATTGGGCGTTGGTGGTGTGGTGCAGAAGCAGGATGAGGGTTTTGGTGCGCTGTCTTCGCCGCCGGCGGTGGCTGCGATCAGCACTGCCGCGACCGATGATGAGAGATCAGAGAATGGGGTCCCTGTTGGGTATAGAAAACCACCAACCTCTCAGCCTCAGACACAAACACAAGCTCAGACTCAGTTTCCCCAATTTCAACAGAAGTCAACTGGTGTCTTTGATTTGCCTTCCCCTGATTCAGTTTCAAGTGATAGTAGTCTTTCAAATTCAATGTCACGCCCAAAACCTGTTATCTATCAAGACCAAGTTCAAATTCAATCTGGAACTTCATGGGTTCCTACTAACTCTGTTGATCCCAAACTTAATGTCTCTGATCAACATGGACAGTTCCAGATGCATCAGCAACATGTACAGGACCGTGGATATGTTTTGCAACAACAGCAATTTGATCAGCAACAACAGGCTCAACTCCCACAACAGTTTATACACGGCACACATTTAATTCACCAGCATACCCCTGCTTACTATACTGTATATCAGCAGCAACAGCTCCATCCCCAGCATCACCATCTGCTTGATCAACAATACCCAGTTTATTATGTGCCTGCTACACAGGCCCAAGCATACAACTTGTCCACACAGCAGGCTAATGTAGGTGAATCTGTGACAACAACTGTCCCTTCTAACCTGCCCCAAAATCTGCCAAATCCTGCTGCAATGGTTCCATCATCTGCTGCTTACAACCCCGCGAGAAATGCTCCCTTGCCTAATTCTGAAGTAGCAGCAGGTGCATACAGATTAGTTCAAGTTCCTACTAATCAGCATCAGCAACAATATGTTGCTTACTCCCAGATTCATCATCCTTCTCAATCCATGGCCCCTAATTCTGCAGCACCTGCTAATTATGCTTATGACTATGCCAATTCTGCTCATGCTCAAATGTTTTATACTCAACCTTTGGCACCCCAACAAATCCCTTCGCAGTACCAGACCATGACAGCTGCTGAAGTTTCTGCTCAGCTTCCCTCGGAGGGCATGAAGCAGCAGGTAAGATTGTAA 1911 0.5207 MEVQTPPQPTPPPPHLTFPDSANSSPRSRNTDSWDEPHPPSTTTTTKLRLMCSYGGQIVPRPHDKSLCYVGGDTRIVVVDRQTSLSDLSTRLSKSFLNGLPFLLKYQLPNEDLDSLVSVTTDEDLENMIDEYDHRTSSKPSRIRLFLFPAQPDLVQTVGPGTGPVTAKTEDWFLNALNGAGGLSDSGSMNGLLGLDDEEAVAAGVVNNNLTPTQHKNLKQGQEVQSVPDSPMLETNSSFGSTSSSPSVANLPPIKVRVEDGGNGGGEIRAQDQKVVGIEEQFAQLGVGGVVQKQDEGFGALSSPPAVAAISTAATDDERSENGVPVGYRKPPTSQPQTQTQAQTQFPQFQQKSTGVFDLPSPDSVSSDSSLSNSMSRPKPVIYQDQVQIQSGTSWVPTNSVDPKLNVSDQHGQFQMHQQHVQDRGYVLQQQQFDQQQQAQLPQQFIHGTHLIHQHTPAYYTVYQQQQLHPQHHHLLDQQYPVYYVPATQAQAYNLSTQQANVGESVTTTVPSNLPQNLPNPAAMVPSSAAYNPARNAPLPNSEVAAGAYRLVQVPTNQHQQQYVAYSQIHHPSQSMAPNSAAPANYAYDYANSAHAQMFYTQPLAPQQIPSQYQTMTAAEVSAQLPSEGMKQQVRL. 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g02144 636 MobiDBLite consensus disorder prediction 331 377 - -
Seca10g02144 636 SMART PB1_new 62 150 IPR000270 GO:0005515
Seca10g02144 636 MobiDBLite consensus disorder prediction 20 45 - -
Seca10g02144 636 Pfam PB1 domain 63 149 IPR000270 GO:0005515
Seca10g02144 636 CDD PB1_UP2 51 148 - -
Seca10g02144 636 PANTHER OS05G0427100 PROTEIN-RELATED 19 492 - -
Seca10g02144 636 MobiDBLite consensus disorder prediction 1 19 - -
Seca10g02144 636 MobiDBLite consensus disorder prediction 309 377 - -
Seca10g02144 636 SUPERFAMILY CAD & PB1 domains 63 156 - -
Seca10g02144 636 MobiDBLite consensus disorder prediction 1 45 - -
Seca10g02144 636 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 67 150 - -
Seca10g02144 636 ProSiteProfiles PB1 domain profile. 47 150 IPR000270 GO:0005515
Seca10g02144 636 Gene3D - 67 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g02144 Seca-Chr10 24514304 24516972 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g02144 41 217 MAP Kinase Kinase Kinase AT1G79570 36.111 1.28e-24 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g02144 - - psat:127098305 642.114