Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g02136 ATGAAGCAGAGAATAACCATGAAACCCTTGTCCTCGTGTTCTCCCCTAATAATTCACTCATACTCATACACCACTCTCTTCCTTCTCCTAGCCACAACCGCTTTCTCTTCCGTGGACCCCAAGTACCAAGCTTGCGAGCCCAAGACCTGCGAAAAAGGCCCAAACATAAGCTACCCTTTCTACATCAAAGGAAAACAAGAACCCTTCTGTGGGTACCCTCGTTTTGGGCTCACTTGTGGCGAAAATGGCTTCCCAATTCTCAAAAGGGGGAATAATAGCCAATTCATCGTGCACGAGATTTTCTACAATAGCCAGTCACTTCGAGTCTCCATCCCCTTGTTCACCGATTGTGTTGCTCCAATGCGCAATCTCACCTCCGGTAGGAGGTTCAGCGTTGCTCCTAACCAAAAGGAAGTGTTGTTGTTCTACGGCTGCGACTTAACATCGCTTCCCAAAAGGATGCAGGAGAACACGATTGGGTGTTATGCAGGGAACAGAACGCGTTCGGTTGTGGCGTTGTATAGGGAGGACCGGAATTTGAGCATAGCAGCGAAGAATTGCGAGGGCAGAGTGGTGAATACGACGGTGGAAGGTGAGATTGAGAAAGGAGGGATTGAAGAGGCGCTGCAGAGAGGGTTTTTGTTGAATTGGACAGAGAGTTATTGTGGCGATTGCAGGAATAGTGGAGGGAGGTGCGGGTTCGACTTAGACAAACGCATATACGCTTTCAGGTGCTACTGTCCTGATAGAGTCGATACCACCAAATGTGATGTACCATCACCAATACAATCAGGTGTAGAGTGA 804 0.4838 MKQRITMKPLSSCSPLIIHSYSYTTLFLLLATTAFSSVDPKYQACEPKTCEKGPNISYPFYIKGKQEPFCGYPRFGLTCGENGFPILKRGNNSQFIVHEIFYNSQSLRVSIPLFTDCVAPMRNLTSGRRFSVAPNQKEVLLFYGCDLTSLPKRMQENTIGCYAGNRTRSVVALYREDRNLSIAAKNCEGRVVNTTVEGEIEKGGIEEALQRGFLLNWTESYCGDCRNSGGRCGFDLDKRIYAFRCYCPDRVDTTKCDVPSPIQSGVE. 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g02136 267 Pfam Wall-associated receptor kinase galacturonan-binding 45 110 IPR025287 GO:0030247
Seca10g02136 267 PANTHER OS01G0690200 PROTEIN 22 257 - -
Seca10g02136 267 Pfam Wall-associated receptor kinase C-terminal 178 249 IPR032872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g02136 Seca-Chr10 24426718 24428547 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g02136 43 234 C3H Transcription Factor Family AT2G46495 26.000 2.22e-10 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g02136 - - ahf:112803863 259.61