Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g02135 ATGTCAAAGGTCCCATCTCTATCGTCATACTTGTTACATTTTAATAATATTCTTCTTCTTCTCCTCCTTCTCTGCTTCCATCTCTCCTTCATCTTAGAAATCCTAAATGAAATGAACCCAATAATCCTCTTGTCTACCCTGCTCAAGCCCTTCTGTTCTCCTCTTCTACAATCATACATCATTTTCTTCTCTCTTCTAACCACACTTACTTTGTCTTCTGTGGATCCAAAGTTCCAAGCTTGCGAGCCCAAGACCTGTGGCAATGGCCAAAACATAAGCTACCCATTTTACATCCAAGGGACACAAGAACCCTTTTGTGGGAATCCTGGTTTTGAGCTCAGTTGTGGCAAGAATGGCTTCCCAATTCTCAATCTTATCAATACCAACTACACAATTCATCAAATTTTCTACAACAACAACACACTCCGAGTGTCCAACCCCGTTTTTTCAGAATCAAACACCACTGCATGTATTGCTCCCACACAGAACATAACAATTGGAAAGTACAGGTTCCGATTTGCTCCCAACCAAAGGGATCTATTGTTGTTCTACGGCTGTGACTTAACATCGGTTGGTGAAGAGATGCAAGAGCACAGGATTGGGTGTTCTGCAGAAAACCGAACGAGTTCAGTTGTGGCCTTTTATAGGGAGCATCAGAATTTGAGCTTAGTGAGGGAGAATTGCAAGGGTAGTAGGTTAGTGAATGCAGTAGTAGAAGATGGGAAAAGAGGGATTCAAGAGGCACTGAAGAAAGGGTTTATGTTGAATTGGAATGCTTCTAACTGCAGCGAGTGCACCAACAGTGGAGGGAGGTGCGGGTTCGACCTTGACCCTGATACATATGCGTTCAGGTGCTACTGTCCTGACAGGGTTCATGCTGTGAAATGTGGTTCAAGTCAAGGGAACTTCATTGAGACCGTGAACTGTAGCATTGATATATCAGACTCTAAAAGGATTGCTCCAGTTTATGAAATTCTTTTCCTTTTTTTGTTTCCTCAACTTATGCTACTTCTCTTGGCGCCTGGAGATGGGAAAGGCACCAAGGAGACTGTCCACCTTCATTTAATTGGGGATATGTTGGCAACATCAGCTTCCCTTTCACCAAAACAGGACACCAATACTGTGGCCTGTTTAGGTGTTGGACTCACAAGCATCTTGATAATTGGGTTGCTTCTTCTGCTTTACAAAATAAAACACAGCTCCTCAGGTGGTGGATTCCAAACAAGAAATACTAACCCTTCAAATCCAGATGTAGAAAATGCCATGGCGTACTTTAAAGTTCCTGTCTTCTCATACAAGGAGCTTGAAGAAGCAACAAACCATTTTGACCATTATAGACAAATTGGAGATGGAGGCTTTGGAACTGTGTACTATGGGAAACTCCGAGATGGAAGGGAAGTTGCTGTCAAACACATGTATGAGCACAACTACAGGCGAGTAGAACAGTTCCTGAATGAAGTTAAGATCCTCACACGTTTGCGCCATAAAAATCTTGTGCAACTCTATGGCTGCACTTCACGAGATAGCCGTGACCTGCTGCTTGTGTATGAATATATTCCAAATGGGACTGTTGCTTGCCATCTACATGGAGAATTGGCAAAGCCTGGCTTACTACCATGTAATGTAAAACCATCATTGCCAATCTCACCAGAATGGGATGATGTTGGATTATTGAAGAATATGAAGCCACCTAATTCTTCACCAATATCAGTTACTGATAACTGGGAAAGTAAATCTACTACGCCTAATTCTGTGTTTGATTTCCTTTTTGTACTGTGTCTGTGTTGTGTTGTGCTTCTTCCATCGGCTGCAACTGAAGGGGAAGAAAATGGGGAATGTCCGCCACCTCGTCTTTGTGGATATCTCGGGGAAATCTCCTTCCCCTTCACCAACTCTACGAATCCAGAATGTGGCTTCCAAATAATTGGTTGTGAAGACAACGCTGCAGATAAAGAAATCTATCTAGGAAACCAACGCTATAAAATTGAAAGCATCCATCAGCATGAAATGGAAATGTTATATTCGATTTTCATCTACAACGACAGTGACACTCAATTTCATCCAGAGCATCCTCTCAACTTTCTTAACTTCTTCATATGCGATCCTAGCTTTACCCCTGAACCACGCTCACGCATGATCACATACAGAATCTGTCCTTTCTACGACATCTACTATACAACTTCTCCACATCCTGATCTCAAGTTGCCCTTTCTTCCATCATTTGCATGCTTACCTGTTCAGTTTCCAAAACCTTATTCCCCTGGACAATGTGTGTCCTCAATTTTGTTTGTCGAAATTAAAGTAAAATTGGAGTCTTGTGAAGGCTGTTATCTTACAAAAACTTGTCGACTTCACCATGAAAATTCCACTTGTTTCGAATCTTCCAATGCCTTTCCCCCTCCTGCTACTGATGCTGGAACAAATGGCAACGAAAAACATTTGAAGGCTGCGATAATAGGTTTATCTATTGGATTAGCAACAGTGATTACGCTTGCCTTGTTTGCTATTCTTTTTCTGTACAAACCAATAAACAAGTCTTCAGGCGTCCATAGCCAACCAAGAAGCACTTATTCTGGTCCCTACAGAAGAAAGCTTCGAGATGGACGTGAAGTTGCAGTGAAGCGCCTATTTGAGCGCAACTACAGGCCAGTGGAATCATTCAACAATGAAATTCAGATTCTCACACGCATGCGCCACACAAATCTTGTGTCCCTCTATGGCTGCACTTCACGTCACAGTCGTGAGTTGCTGCTAGTATATGAATACATCCCAAATGGCACTCTTAGTTGCCATCTCCATGGTGATAGGGGGAAACATGGCTTATTGCCATGGCCTGTGAGAATGAAAATTGCCATTGAGACTGCTGGTGCATTGGCTTATCTCCATGCTTCTGACATCATTCACCGAGATGTCAAATCCAGCAACATTCTCCTTGACAATAACTTCTGTGTTAAAGTTGCAGATTTTGGACTTTCAAGACTGTTCCCCATTGATGCCACACATGTCTCCACAGCTCCAAGGGGAACCCCAGGTTATGTTGACCCAGACTATCGCATATGCTACCAGCTTACAAGCAAGAGTGATGTGTATAGCTTTGGAGTTGTTCTTGTTGAGCTAATATCATCTTTGCCAGCAGTTGACATGGCCAGGGACAGGGATGAGATTAAGTTGGCAAATCTAGCCATAAGGAAGATTCAAAGAAGGGCGTTTTATGGAAGGAAATACCAAAGGAACTGCCCAACATCTTTTCATTGCGGGAAATTTGGACACATCCAGTTCCCATTCACAAACAAAAACAACCTGGACTGTGGTTTGCCCATAAGGGGCTGTGATGATCAAAATGCAGCAACAGAAGTCCAGTTATCAAACCAAACATGGTATGAATTTGAATCCATCAATGGAAACAATTCAATTTCTGTCATAGACCATAAGCTTCAAAGGCTCTTGGCCTCTAGAAGTTGCAATGCCTTCACTTATAATATTCATGCTACCCGTCCTCCGAGCACTCCTGTACTGCATTTTCAGATCGAAATGGAACACAGTATAACACTGTTAAGATGCAGACACGCTTCTTATAGACCTAGCAATAAATACATAAAGTATACAAGCTGTAATGGCTACGATATCTACTATCATACTCAATCTCCTGAAACAGATGACATGTATACAGGCACTGAAAATGCATGTTCAACCATCCAGCTTCCAATTAAATCATCGCCCTCTATGGACTATTCCACAGGCACAGCCCTTTACAATTTGTTAACAGCTGGATTCCGCATAATATTATTGTTATCGGAGGATTGTGGTAAGTGCTATGAAAATGGAGGCCAATGTCAAGTTGACAAAGAATCATTATATTGTGCCGGTTCCAAAGAACAAGCAGATCCTCCTCAGCCGAGAAAAGCAGATCCTCCTGTACAAGCAGTTTCTCATGATAAACAGAAATGGTTTACGAAGGGTGTTATACTTAAAATAGAGAGTGGCGATGCCTTCTTAGGGGTCCCTGTCTTCTCCTATACAGAGCTTGAGAAAGCAACAAACAAATTTGACGAAGCTAGAGAACTTGGAAGTGGAGGCTATGGGAATGTTTACTATGGAAAGCTCCATGATGGACGGGAAGTTGCTGTCAAGTGCCTATATGAGCACAACTACAGACAAGTGGAGCAGTTCATGAATGAAATAGAGATCCTTACACGTCTGCGCCATAGAAATCTTGTGTCCCTTTATGGCTGCAGTTCTCGGCACAGCCGTGAACTACTGCTTGTGTATGAATATATTCCAAATGGCACGGTTGCTTGTCATCTCCATGAATATCACCAATGCTACCAGCTAACAAGCAAGAGTGATGTATATAGTTTTGGGGTTGTGCTTATTGAGTTAATATCATCTCTGCAAGCAGTTGATATAACCAGAGAAACGGATGAGATTAACTTGTCAAATCTAGCCATAAAGAAGATCCAAAAGCGCGCATTCTGTGAACTGGTAGATCCTTCCCTTGGCTTTGAGTTAGATCAAGAATTTAAAAGGAAAATAGTTTCAGTAGCAGAATTGGCGTTTCAGTGTTTGAAAGAGTACAAGCATGTGAGACCTTCAATGGTAGAAGTTTTGGAGGAGCTGAAGAGAATTGATTCTGGGGAGGATAAGCCAAAGAATATAAAGGAAGCAGATGTTAACCTCCCAGTGTAA 4686 0.421 MSKVPSLSSYLLHFNNILLLLLLLCFHLSFILEILNEMNPIILLSTLLKPFCSPLLQSYIIFFSLLTTLTLSSVDPKFQACEPKTCGNGQNISYPFYIQGTQEPFCGNPGFELSCGKNGFPILNLINTNYTIHQIFYNNNTLRVSNPVFSESNTTACIAPTQNITIGKYRFRFAPNQRDLLLFYGCDLTSVGEEMQEHRIGCSAENRTSSVVAFYREHQNLSLVRENCKGSRLVNAVVEDGKRGIQEALKKGFMLNWNASNCSECTNSGGRCGFDLDPDTYAFRCYCPDRVHAVKCGSSQGNFIETVNCSIDISDSKRIAPVYEILFLFLFPQLMLLLLAPGDGKGTKETVHLHLIGDMLATSASLSPKQDTNTVACLGVGLTSILIIGLLLLLYKIKHSSSGGGFQTRNTNPSNPDVENAMAYFKVPVFSYKELEEATNHFDHYRQIGDGGFGTVYYGKLRDGREVAVKHMYEHNYRRVEQFLNEVKILTRLRHKNLVQLYGCTSRDSRDLLLVYEYIPNGTVACHLHGELAKPGLLPCNVKPSLPISPEWDDVGLLKNMKPPNSSPISVTDNWESKSTTPNSVFDFLFVLCLCCVVLLPSAATEGEENGECPPPRLCGYLGEISFPFTNSTNPECGFQIIGCEDNAADKEIYLGNQRYKIESIHQHEMEMLYSIFIYNDSDTQFHPEHPLNFLNFFICDPSFTPEPRSRMITYRICPFYDIYYTTSPHPDLKLPFLPSFACLPVQFPKPYSPGQCVSSILFVEIKVKLESCEGCYLTKTCRLHHENSTCFESSNAFPPPATDAGTNGNEKHLKAAIIGLSIGLATVITLALFAILFLYKPINKSSGVHSQPRSTYSGPYRRKLRDGREVAVKRLFERNYRPVESFNNEIQILTRMRHTNLVSLYGCTSRHSRELLLVYEYIPNGTLSCHLHGDRGKHGLLPWPVRMKIAIETAGALAYLHASDIIHRDVKSSNILLDNNFCVKVADFGLSRLFPIDATHVSTAPRGTPGYVDPDYRICYQLTSKSDVYSFGVVLVELISSLPAVDMARDRDEIKLANLAIRKIQRRAFYGRKYQRNCPTSFHCGKFGHIQFPFTNKNNLDCGLPIRGCDDQNAATEVQLSNQTWYEFESINGNNSISVIDHKLQRLLASRSCNAFTYNIHATRPPSTPVLHFQIEMEHSITLLRCRHASYRPSNKYIKYTSCNGYDIYYHTQSPETDDMYTGTENACSTIQLPIKSSPSMDYSTGTALYNLLTAGFRIILLLSEDCGKCYENGGQCQVDKESLYCAGSKEQADPPQPRKADPPVQAVSHDKQKWFTKGVILKIESGDAFLGVPVFSYTELEKATNKFDEARELGSGGYGNVYYGKLHDGREVAVKCLYEHNYRQVEQFMNEIEILTRLRHRNLVSLYGCSSRHSRELLLVYEYIPNGTVACHLHEYHQCYQLTSKSDVYSFGVVLIELISSLQAVDITRETDEINLSNLAIKKIQKRAFCELVDPSLGFELDQEFKRKIVSVAELAFQCLKEYKHVRPSMVEVLEELKRIDSGEDKPKNIKEADVNLPV. 1562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g02135 1561 Gene3D Phosphorylase Kinase; domain 1 1326 1423 - -
Seca10g02135 1561 Gene3D Phosphorylase Kinase; domain 1 414 518 - -
Seca10g02135 1561 SUPERFAMILY Protein kinase-like (PK-like) 861 1047 IPR011009 -
Seca10g02135 1561 ProSitePatterns Protein kinases ATP-binding region signature. 1355 1377 IPR017441 GO:0005524
Seca10g02135 1561 ProSitePatterns Protein kinases ATP-binding region signature. 448 470 IPR017441 GO:0005524
Seca10g02135 1561 ProSitePatterns Serine/Threonine protein kinases active-site signature. 966 978 IPR008271 GO:0004672|GO:0006468
Seca10g02135 1561 ProSiteProfiles Protein kinase domain profile. 1349 1561 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca10g02135 1561 SUPERFAMILY Protein kinase-like (PK-like) 422 531 IPR011009 -
Seca10g02135 1561 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 861 1070 IPR044652 GO:0004672
Seca10g02135 1561 SUPERFAMILY Protein kinase-like (PK-like) 1333 1543 IPR011009 -
Seca10g02135 1561 Pfam Protein tyrosine and serine/threonine kinase 863 1046 IPR001245 GO:0004672|GO:0006468
Seca10g02135 1561 Pfam Protein tyrosine and serine/threonine kinase 445 531 IPR001245 GO:0004672|GO:0006468
Seca10g02135 1561 Pfam Protein tyrosine and serine/threonine kinase 1352 1437 IPR001245 GO:0004672|GO:0006468
Seca10g02135 1561 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 412 518 - -
Seca10g02135 1561 SMART serkin_6 840 1127 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca10g02135 1561 ProSiteProfiles Protein kinase domain profile. 442 733 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca10g02135 1561 ProSiteProfiles Protein kinase domain profile. 823 1211 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca10g02135 1561 Gene3D Transferase(Phosphotransferase) domain 1 924 1086 - -
Seca10g02135 1561 Gene3D Transferase(Phosphotransferase) domain 1 1424 1545 - -
Seca10g02135 1561 Gene3D Phosphorylase Kinase; domain 1 855 923 - -
Seca10g02135 1561 Pfam Wall-associated receptor kinase galacturonan-binding 81 145 IPR025287 GO:0030247
Seca10g02135 1561 Pfam Wall-associated receptor kinase C-terminal 1213 1284 IPR032872 -
Seca10g02135 1561 Pfam Wall-associated receptor kinase C-terminal 220 289 IPR032872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g02135 Seca-Chr10 24407435 24423235 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g02135 547 588 Receptor kinase-like Gene Family AT1G25390 60.465 2.79e-07 53.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Seca10g02135 PK_Tyr_Ser-Thr 2.8e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g02135 - - var:108334729 427.172