Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca10g02135 | ATGTCAAAGGTCCCATCTCTATCGTCATACTTGTTACATTTTAATAATATTCTTCTTCTTCTCCTCCTTCTCTGCTTCCATCTCTCCTTCATCTTAGAAATCCTAAATGAAATGAACCCAATAATCCTCTTGTCTACCCTGCTCAAGCCCTTCTGTTCTCCTCTTCTACAATCATACATCATTTTCTTCTCTCTTCTAACCACACTTACTTTGTCTTCTGTGGATCCAAAGTTCCAAGCTTGCGAGCCCAAGACCTGTGGCAATGGCCAAAACATAAGCTACCCATTTTACATCCAAGGGACACAAGAACCCTTTTGTGGGAATCCTGGTTTTGAGCTCAGTTGTGGCAAGAATGGCTTCCCAATTCTCAATCTTATCAATACCAACTACACAATTCATCAAATTTTCTACAACAACAACACACTCCGAGTGTCCAACCCCGTTTTTTCAGAATCAAACACCACTGCATGTATTGCTCCCACACAGAACATAACAATTGGAAAGTACAGGTTCCGATTTGCTCCCAACCAAAGGGATCTATTGTTGTTCTACGGCTGTGACTTAACATCGGTTGGTGAAGAGATGCAAGAGCACAGGATTGGGTGTTCTGCAGAAAACCGAACGAGTTCAGTTGTGGCCTTTTATAGGGAGCATCAGAATTTGAGCTTAGTGAGGGAGAATTGCAAGGGTAGTAGGTTAGTGAATGCAGTAGTAGAAGATGGGAAAAGAGGGATTCAAGAGGCACTGAAGAAAGGGTTTATGTTGAATTGGAATGCTTCTAACTGCAGCGAGTGCACCAACAGTGGAGGGAGGTGCGGGTTCGACCTTGACCCTGATACATATGCGTTCAGGTGCTACTGTCCTGACAGGGTTCATGCTGTGAAATGTGGTTCAAGTCAAGGGAACTTCATTGAGACCGTGAACTGTAGCATTGATATATCAGACTCTAAAAGGATTGCTCCAGTTTATGAAATTCTTTTCCTTTTTTTGTTTCCTCAACTTATGCTACTTCTCTTGGCGCCTGGAGATGGGAAAGGCACCAAGGAGACTGTCCACCTTCATTTAATTGGGGATATGTTGGCAACATCAGCTTCCCTTTCACCAAAACAGGACACCAATACTGTGGCCTGTTTAGGTGTTGGACTCACAAGCATCTTGATAATTGGGTTGCTTCTTCTGCTTTACAAAATAAAACACAGCTCCTCAGGTGGTGGATTCCAAACAAGAAATACTAACCCTTCAAATCCAGATGTAGAAAATGCCATGGCGTACTTTAAAGTTCCTGTCTTCTCATACAAGGAGCTTGAAGAAGCAACAAACCATTTTGACCATTATAGACAAATTGGAGATGGAGGCTTTGGAACTGTGTACTATGGGAAACTCCGAGATGGAAGGGAAGTTGCTGTCAAACACATGTATGAGCACAACTACAGGCGAGTAGAACAGTTCCTGAATGAAGTTAAGATCCTCACACGTTTGCGCCATAAAAATCTTGTGCAACTCTATGGCTGCACTTCACGAGATAGCCGTGACCTGCTGCTTGTGTATGAATATATTCCAAATGGGACTGTTGCTTGCCATCTACATGGAGAATTGGCAAAGCCTGGCTTACTACCATGTAATGTAAAACCATCATTGCCAATCTCACCAGAATGGGATGATGTTGGATTATTGAAGAATATGAAGCCACCTAATTCTTCACCAATATCAGTTACTGATAACTGGGAAAGTAAATCTACTACGCCTAATTCTGTGTTTGATTTCCTTTTTGTACTGTGTCTGTGTTGTGTTGTGCTTCTTCCATCGGCTGCAACTGAAGGGGAAGAAAATGGGGAATGTCCGCCACCTCGTCTTTGTGGATATCTCGGGGAAATCTCCTTCCCCTTCACCAACTCTACGAATCCAGAATGTGGCTTCCAAATAATTGGTTGTGAAGACAACGCTGCAGATAAAGAAATCTATCTAGGAAACCAACGCTATAAAATTGAAAGCATCCATCAGCATGAAATGGAAATGTTATATTCGATTTTCATCTACAACGACAGTGACACTCAATTTCATCCAGAGCATCCTCTCAACTTTCTTAACTTCTTCATATGCGATCCTAGCTTTACCCCTGAACCACGCTCACGCATGATCACATACAGAATCTGTCCTTTCTACGACATCTACTATACAACTTCTCCACATCCTGATCTCAAGTTGCCCTTTCTTCCATCATTTGCATGCTTACCTGTTCAGTTTCCAAAACCTTATTCCCCTGGACAATGTGTGTCCTCAATTTTGTTTGTCGAAATTAAAGTAAAATTGGAGTCTTGTGAAGGCTGTTATCTTACAAAAACTTGTCGACTTCACCATGAAAATTCCACTTGTTTCGAATCTTCCAATGCCTTTCCCCCTCCTGCTACTGATGCTGGAACAAATGGCAACGAAAAACATTTGAAGGCTGCGATAATAGGTTTATCTATTGGATTAGCAACAGTGATTACGCTTGCCTTGTTTGCTATTCTTTTTCTGTACAAACCAATAAACAAGTCTTCAGGCGTCCATAGCCAACCAAGAAGCACTTATTCTGGTCCCTACAGAAGAAAGCTTCGAGATGGACGTGAAGTTGCAGTGAAGCGCCTATTTGAGCGCAACTACAGGCCAGTGGAATCATTCAACAATGAAATTCAGATTCTCACACGCATGCGCCACACAAATCTTGTGTCCCTCTATGGCTGCACTTCACGTCACAGTCGTGAGTTGCTGCTAGTATATGAATACATCCCAAATGGCACTCTTAGTTGCCATCTCCATGGTGATAGGGGGAAACATGGCTTATTGCCATGGCCTGTGAGAATGAAAATTGCCATTGAGACTGCTGGTGCATTGGCTTATCTCCATGCTTCTGACATCATTCACCGAGATGTCAAATCCAGCAACATTCTCCTTGACAATAACTTCTGTGTTAAAGTTGCAGATTTTGGACTTTCAAGACTGTTCCCCATTGATGCCACACATGTCTCCACAGCTCCAAGGGGAACCCCAGGTTATGTTGACCCAGACTATCGCATATGCTACCAGCTTACAAGCAAGAGTGATGTGTATAGCTTTGGAGTTGTTCTTGTTGAGCTAATATCATCTTTGCCAGCAGTTGACATGGCCAGGGACAGGGATGAGATTAAGTTGGCAAATCTAGCCATAAGGAAGATTCAAAGAAGGGCGTTTTATGGAAGGAAATACCAAAGGAACTGCCCAACATCTTTTCATTGCGGGAAATTTGGACACATCCAGTTCCCATTCACAAACAAAAACAACCTGGACTGTGGTTTGCCCATAAGGGGCTGTGATGATCAAAATGCAGCAACAGAAGTCCAGTTATCAAACCAAACATGGTATGAATTTGAATCCATCAATGGAAACAATTCAATTTCTGTCATAGACCATAAGCTTCAAAGGCTCTTGGCCTCTAGAAGTTGCAATGCCTTCACTTATAATATTCATGCTACCCGTCCTCCGAGCACTCCTGTACTGCATTTTCAGATCGAAATGGAACACAGTATAACACTGTTAAGATGCAGACACGCTTCTTATAGACCTAGCAATAAATACATAAAGTATACAAGCTGTAATGGCTACGATATCTACTATCATACTCAATCTCCTGAAACAGATGACATGTATACAGGCACTGAAAATGCATGTTCAACCATCCAGCTTCCAATTAAATCATCGCCCTCTATGGACTATTCCACAGGCACAGCCCTTTACAATTTGTTAACAGCTGGATTCCGCATAATATTATTGTTATCGGAGGATTGTGGTAAGTGCTATGAAAATGGAGGCCAATGTCAAGTTGACAAAGAATCATTATATTGTGCCGGTTCCAAAGAACAAGCAGATCCTCCTCAGCCGAGAAAAGCAGATCCTCCTGTACAAGCAGTTTCTCATGATAAACAGAAATGGTTTACGAAGGGTGTTATACTTAAAATAGAGAGTGGCGATGCCTTCTTAGGGGTCCCTGTCTTCTCCTATACAGAGCTTGAGAAAGCAACAAACAAATTTGACGAAGCTAGAGAACTTGGAAGTGGAGGCTATGGGAATGTTTACTATGGAAAGCTCCATGATGGACGGGAAGTTGCTGTCAAGTGCCTATATGAGCACAACTACAGACAAGTGGAGCAGTTCATGAATGAAATAGAGATCCTTACACGTCTGCGCCATAGAAATCTTGTGTCCCTTTATGGCTGCAGTTCTCGGCACAGCCGTGAACTACTGCTTGTGTATGAATATATTCCAAATGGCACGGTTGCTTGTCATCTCCATGAATATCACCAATGCTACCAGCTAACAAGCAAGAGTGATGTATATAGTTTTGGGGTTGTGCTTATTGAGTTAATATCATCTCTGCAAGCAGTTGATATAACCAGAGAAACGGATGAGATTAACTTGTCAAATCTAGCCATAAAGAAGATCCAAAAGCGCGCATTCTGTGAACTGGTAGATCCTTCCCTTGGCTTTGAGTTAGATCAAGAATTTAAAAGGAAAATAGTTTCAGTAGCAGAATTGGCGTTTCAGTGTTTGAAAGAGTACAAGCATGTGAGACCTTCAATGGTAGAAGTTTTGGAGGAGCTGAAGAGAATTGATTCTGGGGAGGATAAGCCAAAGAATATAAAGGAAGCAGATGTTAACCTCCCAGTGTAA | 4686 | 0.421 | MSKVPSLSSYLLHFNNILLLLLLLCFHLSFILEILNEMNPIILLSTLLKPFCSPLLQSYIIFFSLLTTLTLSSVDPKFQACEPKTCGNGQNISYPFYIQGTQEPFCGNPGFELSCGKNGFPILNLINTNYTIHQIFYNNNTLRVSNPVFSESNTTACIAPTQNITIGKYRFRFAPNQRDLLLFYGCDLTSVGEEMQEHRIGCSAENRTSSVVAFYREHQNLSLVRENCKGSRLVNAVVEDGKRGIQEALKKGFMLNWNASNCSECTNSGGRCGFDLDPDTYAFRCYCPDRVHAVKCGSSQGNFIETVNCSIDISDSKRIAPVYEILFLFLFPQLMLLLLAPGDGKGTKETVHLHLIGDMLATSASLSPKQDTNTVACLGVGLTSILIIGLLLLLYKIKHSSSGGGFQTRNTNPSNPDVENAMAYFKVPVFSYKELEEATNHFDHYRQIGDGGFGTVYYGKLRDGREVAVKHMYEHNYRRVEQFLNEVKILTRLRHKNLVQLYGCTSRDSRDLLLVYEYIPNGTVACHLHGELAKPGLLPCNVKPSLPISPEWDDVGLLKNMKPPNSSPISVTDNWESKSTTPNSVFDFLFVLCLCCVVLLPSAATEGEENGECPPPRLCGYLGEISFPFTNSTNPECGFQIIGCEDNAADKEIYLGNQRYKIESIHQHEMEMLYSIFIYNDSDTQFHPEHPLNFLNFFICDPSFTPEPRSRMITYRICPFYDIYYTTSPHPDLKLPFLPSFACLPVQFPKPYSPGQCVSSILFVEIKVKLESCEGCYLTKTCRLHHENSTCFESSNAFPPPATDAGTNGNEKHLKAAIIGLSIGLATVITLALFAILFLYKPINKSSGVHSQPRSTYSGPYRRKLRDGREVAVKRLFERNYRPVESFNNEIQILTRMRHTNLVSLYGCTSRHSRELLLVYEYIPNGTLSCHLHGDRGKHGLLPWPVRMKIAIETAGALAYLHASDIIHRDVKSSNILLDNNFCVKVADFGLSRLFPIDATHVSTAPRGTPGYVDPDYRICYQLTSKSDVYSFGVVLVELISSLPAVDMARDRDEIKLANLAIRKIQRRAFYGRKYQRNCPTSFHCGKFGHIQFPFTNKNNLDCGLPIRGCDDQNAATEVQLSNQTWYEFESINGNNSISVIDHKLQRLLASRSCNAFTYNIHATRPPSTPVLHFQIEMEHSITLLRCRHASYRPSNKYIKYTSCNGYDIYYHTQSPETDDMYTGTENACSTIQLPIKSSPSMDYSTGTALYNLLTAGFRIILLLSEDCGKCYENGGQCQVDKESLYCAGSKEQADPPQPRKADPPVQAVSHDKQKWFTKGVILKIESGDAFLGVPVFSYTELEKATNKFDEARELGSGGYGNVYYGKLHDGREVAVKCLYEHNYRQVEQFMNEIEILTRLRHRNLVSLYGCSSRHSRELLLVYEYIPNGTVACHLHEYHQCYQLTSKSDVYSFGVVLIELISSLQAVDITRETDEINLSNLAIKKIQKRAFCELVDPSLGFELDQEFKRKIVSVAELAFQCLKEYKHVRPSMVEVLEELKRIDSGEDKPKNIKEADVNLPV. | 1562 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca10g02135 | 1561 | Gene3D | Phosphorylase Kinase; domain 1 | 1326 | 1423 | - | - | |
Seca10g02135 | 1561 | Gene3D | Phosphorylase Kinase; domain 1 | 414 | 518 | - | - | |
Seca10g02135 | 1561 | SUPERFAMILY | Protein kinase-like (PK-like) | 861 | 1047 | IPR011009 | - | |
Seca10g02135 | 1561 | ProSitePatterns | Protein kinases ATP-binding region signature. | 1355 | 1377 | IPR017441 | GO:0005524 | |
Seca10g02135 | 1561 | ProSitePatterns | Protein kinases ATP-binding region signature. | 448 | 470 | IPR017441 | GO:0005524 | |
Seca10g02135 | 1561 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 966 | 978 | IPR008271 | GO:0004672|GO:0006468 | |
Seca10g02135 | 1561 | ProSiteProfiles | Protein kinase domain profile. | 1349 | 1561 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca10g02135 | 1561 | SUPERFAMILY | Protein kinase-like (PK-like) | 422 | 531 | IPR011009 | - | |
Seca10g02135 | 1561 | PANTHER | LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 | 861 | 1070 | IPR044652 | GO:0004672 | |
Seca10g02135 | 1561 | SUPERFAMILY | Protein kinase-like (PK-like) | 1333 | 1543 | IPR011009 | - | |
Seca10g02135 | 1561 | Pfam | Protein tyrosine and serine/threonine kinase | 863 | 1046 | IPR001245 | GO:0004672|GO:0006468 | |
Seca10g02135 | 1561 | Pfam | Protein tyrosine and serine/threonine kinase | 445 | 531 | IPR001245 | GO:0004672|GO:0006468 | |
Seca10g02135 | 1561 | Pfam | Protein tyrosine and serine/threonine kinase | 1352 | 1437 | IPR001245 | GO:0004672|GO:0006468 | |
Seca10g02135 | 1561 | FunFam | probable LRR receptor-like serine/threonine-protein kinase At1g53430 | 412 | 518 | - | - | |
Seca10g02135 | 1561 | SMART | serkin_6 | 840 | 1127 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca10g02135 | 1561 | ProSiteProfiles | Protein kinase domain profile. | 442 | 733 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca10g02135 | 1561 | ProSiteProfiles | Protein kinase domain profile. | 823 | 1211 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca10g02135 | 1561 | Gene3D | Transferase(Phosphotransferase) domain 1 | 924 | 1086 | - | - | |
Seca10g02135 | 1561 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1424 | 1545 | - | - | |
Seca10g02135 | 1561 | Gene3D | Phosphorylase Kinase; domain 1 | 855 | 923 | - | - | |
Seca10g02135 | 1561 | Pfam | Wall-associated receptor kinase galacturonan-binding | 81 | 145 | IPR025287 | GO:0030247 | |
Seca10g02135 | 1561 | Pfam | Wall-associated receptor kinase C-terminal | 1213 | 1284 | IPR032872 | - | |
Seca10g02135 | 1561 | Pfam | Wall-associated receptor kinase C-terminal | 220 | 289 | IPR032872 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca10g02135 | Seca-Chr10 | 24407435 | 24423235 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca10g02135 | 547 | 588 | Receptor kinase-like Gene Family | AT1G25390 | 60.465 | 2.79e-07 | 53.5 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_WAK_LRK10L-1 | Seca10g02135 | PK_Tyr_Ser-Thr | 2.8e-36 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca10g02135 | - | - | var:108334729 | 427.172 |