Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g02133 ATGTTCTTGTTAAGCAGTGGTATTGTGCCTTCATTGGCTGGCGTAAGTCACGTTGCAATTCAATTCCCAGCATATGAAAAGATCAAGTCATACATGGCAGAAAAAGATAACACAACTGTTGACAAGCTAAGTCCAGGGAGTGTTGCCATCTCATCATCAATTTCAAAAGTAATTGCCTCTGTAATGACTTATCCACACGAGGTAATACGTTCCAGGTTGCAAGAGCAAGGCCAAGCTAAAAATAGTGGGGTCCAATATGCAGGGGTTATTGATTGTACTAAGAAGGTGTTTCAAAAGGAAGGCATTCCAGGCTTTTATCGTGGTTGTGCAACCAATCTATTAAGAACAACTCCATCTGCTGTTATTACATTCACTAGTTATGAGATGATACACAGGTTTTTAGAGCGGATTGTACCTGAGGACAAAGGGTATCCAGAAGGCCGTTCTAAATCCAGTGAACTTAACAAGCCCCAGCCAAAAGCCAGTGACATCAACATTACAAATGGCACTGATAGGGGGCAATCACCATCTCAATCTAACAAGAAAGCTTCATCAATTCCTCTTGGAAACAAAGAGCAGCTAACCTGA 588 0.415 MFLLSSGIVPSLAGVSHVAIQFPAYEKIKSYMAEKDNTTVDKLSPGSVAISSSISKVIASVMTYPHEVIRSRLQEQGQAKNSGVQYAGVIDCTKKVFQKEGIPGFYRGCATNLLRTTPSAVITFTSYEMIHRFLERIVPEDKGYPEGRSKSSELNKPQPKASDINITNGTDRGQSPSQSNKKASSIPLGNKEQLT. 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g02133 195 MobiDBLite consensus disorder prediction 141 195 - -
Seca10g02133 195 MobiDBLite consensus disorder prediction 151 195 - -
Seca10g02133 195 Gene3D Mitochondrial carrier domain 2 137 IPR023395 -
Seca10g02133 195 Pfam Mitochondrial carrier protein 43 135 IPR018108 -
Seca10g02133 195 SUPERFAMILY Mitochondrial carrier 6 129 IPR023395 -
Seca10g02133 195 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 6 139 IPR044712 GO:0006862|GO:0055085
Seca10g02133 195 ProSiteProfiles Solute carrier (Solcar) repeat profile. 43 133 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g02133 Seca-Chr10 24401866 24402992 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g02133 4 191 Chloroplast and Mitochondria Gene Families AT1G25380 60.733 4.35e-76 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g02133 K15115 - gmx:100797064 314.309