Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g02132 ATGAGTAGCAATGGCCAAGCTTCTGGTGCTAGTCACAACATCAGGGGTTTAATCTGCAACGCTAGTGCTGGTGCTGCTGCTGGGGCAATAGCGGCTACGTTTGTGTGCCCATTGGATGTGATCAAGACAAGGCTACAAGTTCATGGCCTTCCTCCTGCGCAGAAAGGTAGTGTCATTGTCACGGGTTTGCAGAATATAGTGAGGGCTGAAGGCTTCAGGGGAATGTACCGTGGCCTTTCACCAACAATACTGGCATTACTTCCAAACTGGGCAGTTTACTTCACAGCTTATGAGCAACTAAAAGGCCTGCTTCGATCACGTGATGGTTGCAACGAACTCACTACTATTGGAAATATTATAGCTGCTGCTGGTGCTGGAGCGGCAACAGCTATTTCTACAAATCCATTGTGGGTTGTTAAAACAAGACTTCAAACCCAAGGAATGAGACCTGATGTTGTTCCATACAAGAGTGTTCTATCTGCTTTGACAAGGATTACACATGAGGAAGGCATACGTGGGCTATATAGGTCAGTTTCTTAA 540 0.463 MSSNGQASGASHNIRGLICNASAGAAAGAIAATFVCPLDVIKTRLQVHGLPPAQKGSVIVTGLQNIVRAEGFRGMYRGLSPTILALLPNWAVYFTAYEQLKGLLRSRDGCNELTTIGNIIAAAGAGAATAISTNPLWVVKTRLQTQGMRPDVVPYKSVLSALTRITHEEGIRGLYRSVS. 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g02132 179 SUPERFAMILY Mitochondrial carrier 17 178 IPR023395 -
Seca10g02132 179 ProSiteProfiles Solute carrier (Solcar) repeat profile. 113 179 IPR018108 -
Seca10g02132 179 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 18 177 IPR044712 GO:0006862|GO:0055085
Seca10g02132 179 PRINTS Mitochondrial carrier protein signature 20 33 IPR002067 GO:0055085
Seca10g02132 179 PRINTS Mitochondrial carrier protein signature 33 47 IPR002067 GO:0055085
Seca10g02132 179 PRINTS Mitochondrial carrier protein signature 128 146 IPR002067 GO:0055085
Seca10g02132 179 PRINTS Mitochondrial carrier protein signature 78 98 IPR002067 GO:0055085
Seca10g02132 179 Pfam Mitochondrial carrier protein 113 178 IPR018108 -
Seca10g02132 179 Pfam Mitochondrial carrier protein 19 105 IPR018108 -
Seca10g02132 179 FunFam Nicotinamide adenine dinucleotide transporter 1, chloroplastic 2 109 - -
Seca10g02132 179 Gene3D Mitochondrial carrier domain 3 179 IPR023395 -
Seca10g02132 179 ProSiteProfiles Solute carrier (Solcar) repeat profile. 15 103 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g02132 Seca-Chr10 24397999 24400908 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g02132 37 176 Chloroplast and Mitochondria Gene Families AT1G25380 35.417 1.14e-16 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g02132 K15115 - gmx:100816376 301.597