Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g02125 ATGGAGGGTTCGACAGTGGAGACGGTGGTAGCGCGAGCTTCGACGGGAGGCGCTAGGCGAGAGCGAGAGATAACTCGTCACAAGTTAGTGGTTATAGTGGCAACAGTTTGTGCAGCTTTAGGAGTTGCAATTTTAATGATCGTAATTTACTACTTTAGAGGGAGATTATGGAAAGAAGAATGTAAAGCTCATCAAGAATTTGAGGCTTTTCTCAGGAATCATGGACCGCTTGCTGTGAGAAGATATAGTTACCTGGACATAAAGAAAATGACCAGTTCCTTTGTAGAAAAATTAGGCCAAGGAGGATATGGAGCTGTTTATAAAGGGAAGTTGCATGGAAGTAAAGTTGCTGTGAAGGTATTGAATAACTTAAAAGGTAATGGGGAGGAATTCATCAATGAGGTAGCTAGCATTAGTAGAACATCTCATGTTAACATCGTTACTCTGCTAGGATTTTGTTTTGAAGGATCTAAGAGAGCATTGGTCTATGAGTTCATGTCTAATGGATCTTTGGAGAAGTTCATATATGGAAATAATCCAATAGCAAAAGATAACCAATTGAATTGTGAAACATTATACCAAATTGCAATAGGTGTTGCTCAAGGATTGGAATATTTGCACAGAGGATGTAATACTCGAATCTTCCATTTTGACATAAAGCCTCATAACATATTGTTGGATGAGGACTTCTGTCCCAAGATCTCAGATTTTGGACTCGCTAAAATATGTCCTAAAAATGAGAGCAAGGTATCCATGTTTGGAGCTAGAGGAACCCCAGGATACATTGCTCCTGAGGTATTTTCAAGAAATTTTGGAATGGTCTCTCACAAGTCAGATGTTTATAGCTTTGGAATGATGGTTTTAGAAATGGTGGGGGGAAGAAAAAATATTAATGTTAATGTTGATGTTGATTGTACTAGTGAAATTTATTTTCCTTATTGGATTTATAAGCGTATAGAAGCAAATGAAGAGCTTGCACTTAGGAACATTACCAATGAAAGTGACAGAGAGAGGATGAGAAAGATGGTTGTAGTAAGTTTGTGGTGCATCCAAACCAATCAGTCAGATCGTCCAACAATGCGTACAGTGGTGGAGATGCTTGAAGGGAGAATTGAGAACTTGACAATGCCACCAAAACCGTTCCTGTCATCTCCTTCAAGTTCAATGCGCCATTCTTCAACAGATTGA 1188 0.3897 MEGSTVETVVARASTGGARREREITRHKLVVIVATVCAALGVAILMIVIYYFRGRLWKEECKAHQEFEAFLRNHGPLAVRRYSYLDIKKMTSSFVEKLGQGGYGAVYKGKLHGSKVAVKVLNNLKGNGEEFINEVASISRTSHVNIVTLLGFCFEGSKRALVYEFMSNGSLEKFIYGNNPIAKDNQLNCETLYQIAIGVAQGLEYLHRGCNTRIFHFDIKPHNILLDEDFCPKISDFGLAKICPKNESKVSMFGARGTPGYIAPEVFSRNFGMVSHKSDVYSFGMMVLEMVGGRKNINVNVDVDCTSEIYFPYWIYKRIEANEELALRNITNESDRERMRKMVVVSLWCIQTNQSDRPTMRTVVEMLEGRIENLTMPPKPFLSSPSSSMRHSSTD. 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g02125 395 SMART serkin_6 92 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca10g02125 395 SUPERFAMILY Protein kinase-like (PK-like) 76 368 IPR011009 -
Seca10g02125 395 ProSitePatterns Serine/Threonine protein kinases active-site signature. 214 226 IPR008271 GO:0004672|GO:0006468
Seca10g02125 395 ProSitePatterns Protein kinases ATP-binding region signature. 98 119 IPR017441 GO:0005524
Seca10g02125 395 MobiDBLite consensus disorder prediction 375 395 - -
Seca10g02125 395 FunFam PR5-like receptor kinase 166 379 - -
Seca10g02125 395 Gene3D Transferase(Phosphotransferase) domain 1 166 376 - -
Seca10g02125 395 Gene3D Phosphorylase Kinase; domain 1 67 165 - -
Seca10g02125 395 Pfam Protein kinase domain 95 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca10g02125 395 ProSiteProfiles Protein kinase domain profile. 92 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca10g02125 395 MobiDBLite consensus disorder prediction 379 395 - -
Seca10g02125 395 FunFam serine/threonine-protein kinase PBS1-like 59 165 - -
Seca10g02125 395 PANTHER RUST RESISTANCE KINASE LR10-RELATED 64 386 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g02125 Seca-Chr10 24357092 24359315 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g02125 38 383 Receptor kinase-like Gene Family AT4G18250 54.648 6.42e-124 372
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Seca10g02125 Pkinase 3.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g02125 - - lang:109359375 533.487