Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g02074 ATGGTGAGAAACAAGTTTTTGGAACACAAGTTAGAAAATCTATTTTGGAAAACGAGTTTCTGGAACTTCTGGAGATTGAGGCTAAGCAAACCCAACTCTGCCATTGGAAAATGTGCCCAGGGTTCAACTCATCAAGAATGGGAAGGAGATTGCTATGTTTGTGCCTATGATGGGCGTTTAAATTTCATTGAAGAGAATGGTGAATACATAATTCATTTACAATTAGAAGTCTTGATAGATGGGTTTGGATGTAAAGGTCATGCCGTGGATGATATTTCTGGTGTCAGATTCAAGGTTGTGAAGGTTTATGGTGTCTCTCCTGGCTCTTTTCAAGGAGAAGAAGGAAAAGCCGAGGTCTTAAATTTGTGGAATGGCTCCTTTCTTTGTTTTCTAGTTCATCCTAAAAATTATTATGAATTTTGCTTCATGAGAATGAAAACTTATGCGGACAATTTTGCATGGGTAATAGTAATTTTTCTGAACTTTATTTGA 492 0.3679 MVRNKFLEHKLENLFWKTSFWNFWRLRLSKPNSAIGKCAQGSTHQEWEGDCYVCAYDGRLNFIEENGEYIIHLQLEVLIDGFGCKGHAVDDISGVRFKVVKVYGVSPGSFQGEEGKAEVLNLWNGSFLCFLVHPKNYYEFCFMRMKTYADNFAWVIVIFLNFI. 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g02074 163 Gene3D - 13 117 IPR012340 -
Seca10g02074 163 Pfam Ribosomal protein S12/S23 30 106 IPR006032 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g02074 Seca-Chr10 23725749 23726737 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g02074 26 106 Cytoplasmic Ribosomal Protein Gene Family AT5G02960 51.852 3.18e-16 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g02074 K02973 - oeu:111403150 74.3294