Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g02010 ATGGCCACTGTCCCTCCCTCACTTCTCTTCTTTGCAAGACTTTCAGGTCTTGCAGTAGCACTTCTTGTCCTCTTCTGGACTTTTGCCTTCAAGTCTAGCTTCCTCCCTTCCTCCCTTTCCCAGCAAGATCTCATCTATGCAGCTCTTCATCCTGTGCTGATGGTCATTGGGTTTATTCTCTTAAGTGGAGAAGCAATTTTGGTGCATAGATGGTTACCTGGTTCAAGGGGATTGAAGAAATCGGTGCACTTGTGCCTTCAAGGGGTGGCTCTAGGTTCTGGGATCTTTGGGATTTGGACAAAATTCCAAGGAAAGGATGGGATTGTGGCAAATTTCTATAGCCTGCATTCTTGGATGGGTTTGATCTGTGTATCCCTCTTTGGAGCTCAGGTACTCTTCTTCATCCTTCATAATTTCCTTACATTTTTTTTTTCTAAATTAACTTTTGCACAGTATTTGAATTATTATCCAGTTATGTCTTAA 483 0.4244 MATVPPSLLFFARLSGLAVALLVLFWTFAFKSSFLPSSLSQQDLIYAALHPVLMVIGFILLSGEAILVHRWLPGSRGLKKSVHLCLQGVALGSGIFGIWTKFQGKDGIVANFYSLHSWMGLICVSLFGAQVLFFILHNFLTFFFSKLTFAQYLNYYPVMS. 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g02010 160 SMART 561_7 49 155 IPR006593 -
Seca10g02010 160 Pfam Eukaryotic cytochrome b561 49 148 IPR006593 -
Seca10g02010 160 Gene3D - 4 158 - -
Seca10g02010 160 ProSiteProfiles Cytochrome b561 domain profile. 11 160 IPR006593 -
Seca10g02010 160 PANTHER CYTOCHROME B561-RELATED 7 146 IPR043205 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g02010 Seca-Chr10 22921676 22923120 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g02010 1 130 Chloroplast and Mitochondria Gene Families AT1G26100 63.158 7.17e-49 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g02010 K08360 - gmx:100781811 223.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g02010 10 22921676 22923120 Seca10g02010 10 22921676 22923120 ECH