Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g02008 ATGGCCCCAAAAACTAGAAGCTCTATCGTTCAAGTAGTTCTTATAGTAGCTTTTTTCATTGTCAATGTTGTTTTATCTGATGATACTGTATCAATTCCTGCTGACAAGCTCCAATTGAGCGCTTGGTTCAATAACAATGTGGCACCCTTGGCTCAAAGAAAGAGTAGTTTGGACCCAGCACTAGTGGCTGCAGAGGAAGGTGCAAAGGTTGTGAAGGTCATGCAAGATGGCAGTGGGGATTTCAAAACCATCACTGAGGCCATTAATAGCATACCTAATGGGAACAATAAGCGTGTGATTGTGTATATTGGTGGTGCAAATTATAATGAGAAAATCAAAATTGAAAGGACAAAACCTTTTGTCACTTTATATGGGGCACCGGAGAACATGCCAAACTTGACATATGGGGGCACTGCAAGACAATATGGCACTGTTGACAGTGCTACTTTGATTGTTGAATCAGATTACTTCATGGCTGCTAACATCATAATCTCGAATTCTGCACCAAGACCTGATGGAAAAAGTCAAGGAGCTCAAGCAGTTGCATTGAGAATTTCTGGTGACAAAGCAGCATTTTATAATTGCAAACTATTAGGATTCCAAGATACTTTGTGTGATGATAGGAATAGGCATTTTTTCAAAAACTGCCTAATTCAAGGCACAGTGGATTTTATTTTTGGAAGTGGGAAGTCGCTATATTTGGATACTAAATTGAGAGTACTTGGTGACAATGGGATGAGTGTAATAGTGGCACAAGCAAGAAAAAGTGAGACAGAGGATAATGTCTATTCATTTGTGCATTGCAATATTACTGGAACAGGAACTGGCACTTTCTTGGGTAGAGCATGGATGTCTCATTCCAAAGTGATCTTTTCTTACACCACTATGAGCACTATCGTTAATCCAGCAGGGTGGAGTAACAATAGACACCCTGAATATGATAGTTCTATGTATTTTGGAGAGTACCAGAATAAAGGGCCGGGTGCAAATCCCAAAGTGCGTGCCCCTTTCACAAAGCAACTAAGTAAAGAAGGTGTCAAACCTTTCATAACTCTTGGAATGATTGAAGGCTCTAAATGGTTACTTCCTCCTCCGACCCCCAGAGTATAA 1110 0.4036 MAPKTRSSIVQVVLIVAFFIVNVVLSDDTVSIPADKLQLSAWFNNNVAPLAQRKSSLDPALVAAEEGAKVVKVMQDGSGDFKTITEAINSIPNGNNKRVIVYIGGANYNEKIKIERTKPFVTLYGAPENMPNLTYGGTARQYGTVDSATLIVESDYFMAANIIISNSAPRPDGKSQGAQAVALRISGDKAAFYNCKLLGFQDTLCDDRNRHFFKNCLIQGTVDFIFGSGKSLYLDTKLRVLGDNGMSVIVAQARKSETEDNVYSFVHCNITGTGTGTFLGRAWMSHSKVIFSYTTMSTIVNPAGWSNNRHPEYDSSMYFGEYQNKGPGANPKVRAPFTKQLSKEGVKPFITLGMIEGSKWLLPPPTPRV. 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g02008 369 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 63 361 - -
Seca10g02008 369 Gene3D - 66 364 IPR012334 -
Seca10g02008 369 ProSitePatterns Pectinesterase signature 2. 218 227 IPR033131 -
Seca10g02008 369 SUPERFAMILY Pectin lyase-like 68 366 IPR011050 -
Seca10g02008 369 FunFam Pectinesterase 66 363 - -
Seca10g02008 369 Pfam Pectinesterase 71 350 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g02008 Seca-Chr10 22912319 22913960 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g02008 5 365 Carbohydrate Esterase AT1G69940 55.679 3.84e-152 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g02008 K01051 - gmx:100786427 595.119