Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca10g01971 | ATGCTCATAAAGTACTTAATTCTACTTTACACTCATCTGAGATGGGTGTTAGATTTCCTTCTATATTATCCCTTTTACAAGCTCCATGATGTGCCAATAATTGGAGATCAAGAGATGAGTATATGCCATTATGAAGGCTCAGAGGAAGATGTAGATTGTGCTGTGTGTCTCTGCAAAATTGAAGAAGGAGAAGAGATTAGAGTGCTGAGATGTGAACATATGTTTCACAGAAATTGCTTAAATAGATGGGAAAGTGGTTTCAAGAATTATGCCACTTGCCCTCTTTGCAGAGAAGCAGTGGGCCCAAGAAAGGTCATCAGTGAGCTTGGTGCTCAAGTTCTGTTGTTTGAGTTTTGTAATTCTATCCGTACTGATGATGACCGTCATACATGGTGGCTACGCTGA | 405 | 0.4 | MLIKYLILLYTHLRWVLDFLLYYPFYKLHDVPIIGDQEMSICHYEGSEEDVDCAVCLCKIEEGEEIRVLRCEHMFHRNCLNRWESGFKNYATCPLCREAVGPRKVISELGAQVLLFEFCNSIRTDDDRHTWWLR. | 135 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca10g01971 | 134 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 33 | 104 | IPR013083 | - | |
Seca10g01971 | 134 | Pfam | Ring finger domain | 52 | 97 | IPR001841 | - | |
Seca10g01971 | 134 | PANTHER | - | 33 | 108 | - | - | |
Seca10g01971 | 134 | SMART | ring_2 | 53 | 96 | IPR001841 | - | |
Seca10g01971 | 134 | SUPERFAMILY | RING/U-box | 45 | 103 | - | - | |
Seca10g01971 | 134 | ProSiteProfiles | Zinc finger RING-type profile. | 53 | 97 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca10g01971 | Seca-Chr10 | 22198178 | 22198582 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca10g01971 | 52 | 113 | C3H Transcription Factor Family | AT1G15100 | 48.387 | 4.80e-13 | 60.5 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca10g01971 | K16282 | - | mof:131154354 | 132.494 |