Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01947 ATGGATCCTTCCTTTCTTTCAAAATCCTTCTTTCTTCATATTGTTCTTATGTTTGGCTTTCTTGGTGTCACCAGACTGTATGCAAGTGACCCTCCACTAACACTGGATTACTATGCATCAACTTGCCCCACTCTGTTTGATATTGTTAGGAAGGAAATGGAATGTGCAGTGCTTTCTGATCCCCGTAACGCAGCCTCCATAGTTCGGCTTCACTTCCATGACTGCTTTATTCAGGGATGCGATGGATCAATTTTGCTTGATGATACAGTGACAATTAAAGGTGAGAAGAAAGCAGCTACCAACATCCACTCTCTGAAAGGCTTCGGACTTATTGATCGAATCAAGAACTTGGTTGAATCAGAGTGTCCCGGAATTGTTTCCTGCGCTGATATTCTCACTATTGCAGCTAGAGATGCTGTGATTCTGGTTGGTGGACCATATTGGGATGTTCCTGTGGGAAGGAAGGATTCTGTCACTGCAAGTTTTGAACTTGCCACTACCAATCTTCCCACTCCGGATGAGAGCCTTGTCTCTATCATCCCCAAGTTTCTTTATCAAGGCCTATCAGTCACTGATATGGTAGCACTTGTAGGAGCTCACACAATTGGCATGGCACAGTGTCAGAATTTCCGATCAAGGATTTATGGAGATTTTGAATCAACTTCAGTGAAAAATCCAATCACTGATAGTCACCTCAGCAACCTGAAATCTATTTGTCCACCTTCTGGGGGAGGAGACAATAACATAACAGCATTAGACTATGTGACACCAAATCTCTTTGACAATTCTTTCTACCACTTACTATTAAAGGGGGAGGGACTTCTTAACTCAGACCAAGAAATGTACTCAAGTGTGTTTGGAATTGGAACAAGAGAGCTTGTCAAGAAGTATGCAGCAGATCCTCTGGCTTTCTTCCAGCAATTCTCTGATTCAATGGTGAAAATGGGAAATATCACAAATTCAGAAAGCTTCATCACTGGAGAAGTTAGGAAGAACTGCAGATTTGTGAACACATAA 1017 0.4208 MDPSFLSKSFFLHIVLMFGFLGVTRLYASDPPLTLDYYASTCPTLFDIVRKEMECAVLSDPRNAASIVRLHFHDCFIQGCDGSILLDDTVTIKGEKKAATNIHSLKGFGLIDRIKNLVESECPGIVSCADILTIAARDAVILVGGPYWDVPVGRKDSVTASFELATTNLPTPDESLVSIIPKFLYQGLSVTDMVALVGAHTIGMAQCQNFRSRIYGDFESTSVKNPITDSHLSNLKSICPPSGGGDNNITALDYVTPNLFDNSFYHLLLKGEGLLNSDQEMYSSVFGIGTRELVKKYAADPLAFFQQFSDSMVKMGNITNSESFITGEVRKNCRFVNT. 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01947 338 Pfam Peroxidase 49 300 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca10g01947 338 SUPERFAMILY Heme-dependent peroxidases 33 337 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca10g01947 338 ProSitePatterns Peroxidases active site signature. 64 75 IPR019794 GO:0004601
Seca10g01947 338 Gene3D - 37 337 - -
Seca10g01947 338 PRINTS Haem peroxidase superfamily signature 144 156 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca10g01947 338 PRINTS Haem peroxidase superfamily signature 192 207 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca10g01947 338 PRINTS Haem peroxidase superfamily signature 126 143 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca10g01947 338 PRINTS Haem peroxidase superfamily signature 64 78 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca10g01947 338 PRINTS Haem peroxidase superfamily signature 253 268 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca10g01947 338 CDD secretory_peroxidase 33 336 IPR033905 GO:0004601|GO:0042744
Seca10g01947 338 FunFam Peroxidase 36 179 - -
Seca10g01947 338 PRINTS Plant peroxidase signature 42 61 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g01947 338 PRINTS Plant peroxidase signature 106 119 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g01947 338 PRINTS Plant peroxidase signature 267 284 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g01947 338 PRINTS Plant peroxidase signature 191 203 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g01947 338 PRINTS Plant peroxidase signature 66 86 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g01947 338 PRINTS Plant peroxidase signature 125 135 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g01947 338 PRINTS Plant peroxidase signature 310 323 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g01947 338 PRINTS Plant peroxidase signature 144 159 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g01947 338 PRINTS Plant peroxidase signature 251 266 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g01947 338 Gene3D Peroxidase, domain 2 170 315 - -
Seca10g01947 338 ProSiteProfiles Plant heme peroxidase family profile. 32 337 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca10g01947 338 PANTHER PEROXIDASE 72-RELATED 32 336 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g01947 338 ProSitePatterns Peroxidases proximal heme-ligand signature. 192 202 IPR019793 -
Seca10g01947 338 FunFam Peroxidase 170 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01947 Seca-Chr10 21928167 21931282 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g01947 28 338 Peroxidase AT1G68850 73.718 0.0 503
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01947 K00430 - gmx:100780750 609.372