Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01940 ATGCTCTTACGTGGCATCATCTCAACTCCTCTCCCATCCTCTCTGCGGCTTCGCCTCGCAACGCCGAGTCAGCCACGAAACGTCAGCGTTTCATCCCGGCTCCATGGCGATTACCCGCTGTCGGTGTCTGACGAGACGCTCGAGTCACGAGGGTTCGTGCTGCGGCGGAGTGTGGAGGGGCTGAACATTGAGGAATTGAACGGCGTTTTCGTGGCGGTGGGGTTTCCGAGGCGGGACCCGGAGAAGATACGTGTGGCGCTGGAGCACACGGAGTCGATTGTTTGGGTGGAGCAGCGGAAGACGCGGCGTGCGATAGCGTTCGCGAGGGCCACAGGGGACGGTGTATTCAACGCGATTATATGGGACGTGGTGGTGGACCCTTCCTTTCAAGGGATTGGGCTCGGCAAGGCCGTTGTGGAGAGGCTCATTCAGGACCTCTTGCGCAAAGGCATTTCCAATATTTCTCTCTACTCTGAGCCGCGTGTTCTCGGGTTCTATAGACCTTTGGGCTTTGTTGCTGACCCTGATGGTATTAGAGGAATGGAGACGTCCTTGGCGTTGTTGAAGAAGGCTGCAGCACATAGAATGGAAGCAATGAAAGCAAAAAGGCACAAACCAATGATGAGGGAAACCCCAGCAACAACGAAATCCAATAAGCCCAACCCCACCACCATCACCATCATCGTGTTCAGCTCAAATTACCAGAGATTTCGACACAAGCGACCCACCTCTTTATCCGAACGGTGTTAA 750 0.5493 MLLRGIISTPLPSSLRLRLATPSQPRNVSVSSRLHGDYPLSVSDETLESRGFVLRRSVEGLNIEELNGVFVAVGFPRRDPEKIRVALEHTESIVWVEQRKTRRAIAFARATGDGVFNAIIWDVVVDPSFQGIGLGKAVVERLIQDLLRKGISNISLYSEPRVLGFYRPLGFVADPDGIRGMETSLALLKKAAAHRMEAMKAKRHKPMMRETPATTKSNKPNPTTITIIVFSSNYQRFRHKRPTSLSERC. 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01940 249 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 53 192 IPR000182 GO:0016747
Seca10g01940 249 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 62 175 IPR016181 -
Seca10g01940 249 PANTHER ACYL-COA N-ACYLTRANSFERASE 30 187 IPR045039 GO:0008080
Seca10g01940 249 Pfam Acetyltransferase (GNAT) family 86 171 IPR000182 GO:0016747
Seca10g01940 249 MobiDBLite consensus disorder prediction 200 222 - -
Seca10g01940 249 FunFam Putative acetyltransferase NSI 57 184 - -
Seca10g01940 249 CDD NAT_SF 103 157 - -
Seca10g01940 249 Gene3D - 56 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01940 Seca-Chr10 21887539 21891189 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Seca10g01940 Acetyltransf_1 1.3e-11 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01940 K22450 - gmx:100778613 272.707