Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01937 ATGGTTCCTAGTGAGATCAGAGGAGTCCACTATCTAGCACCTGAGAACCCATTCCTAATTCCACCCAACTTTGGCTTTCCACAGAGTGACATCCAAAACTTCCATCTGAATACCCTCTTAAGCAGCTTGCCAAATTGCCACTTCCCATCAGCAGGCCATGAATTTGCTCCTCCTTCATGCCTCAGCAGCAACTCAACTTCTGATGAAGCAGATGAACTTCAGTTCAACATCATAGATGAAAGGAAACACAGGAGAATGATATCTAACAGAGAATCAGCTCGCAGATCAAGGATGAGGAAACAAAAACACTTGGATGAACTGTGGTCACAGGTGGTCAGACTCAGAACTGAGAACCACAACCTTATTGACAAACTGAACCATATGTCTGAGTCTCATGACAAAGCTGTCCAAGAGAATGCACGCCTCAAGGAAGAAACTTGTGATCTTCGCCAAATGATAGCAGACATGCAAATTGGAAACTCTTTTGCTTGCACCATGGGAGATTTTGAGGAAGTTCCATGCAACACATCTCAACTCAAATCTGATTCCACAAACCAATCAATCACTCCTGCGGACTTGATTCATGAATGA 591 0.4365 MVPSEIRGVHYLAPENPFLIPPNFGFPQSDIQNFHLNTLLSSLPNCHFPSAGHEFAPPSCLSSNSTSDEADELQFNIIDERKHRRMISNRESARRSRMRKQKHLDELWSQVVRLRTENHNLIDKLNHMSESHDKAVQENARLKEETCDLRQMIADMQIGNSFACTMGDFEEVPCNTSQLKSDSTNQSITPADLIHE. 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01937 196 CDD bZIP_plant_GBF1 82 133 IPR045314 GO:0003700|GO:0006355
Seca10g01937 196 MobiDBLite consensus disorder prediction 176 196 - -
Seca10g01937 196 Coils Coil 125 145 - -
Seca10g01937 196 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 8 162 IPR044521 -
Seca10g01937 196 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 79 142 IPR004827 GO:0003700|GO:0006355
Seca10g01937 196 SMART brlzneu 77 141 IPR004827 GO:0003700|GO:0006355
Seca10g01937 196 SUPERFAMILY Leucine zipper domain 81 130 IPR046347 GO:0003700|GO:0006355
Seca10g01937 196 Pfam bZIP transcription factor 81 136 IPR004827 GO:0003700|GO:0006355
Seca10g01937 196 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 84 99 IPR004827 GO:0003700|GO:0006355
Seca10g01937 196 Gene3D - 79 136 - -
Seca10g01937 196 FunFam BZIP transcription factor 79 130 - -
Seca10g01937 196 Coils Coil 194 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01937 Seca-Chr10 21860597 21861187 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g01937 27 169 bZIP Transcription Factor Family AT3G30530 54.491 1.08e-49 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Seca10g01937 bZIP_1 1.5e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01937 - - gmx:778126 341.658