Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01935 ATGGGAGCATCGGAGAATCCATGCACGATTAGGCCTCTCATTGCTGCACTTTGCTTCCATCAACTCTTTGAGGGAATGGGCTTGGGCGGTTGCATACTTCAGGCTGAATATGGATTCAATGTGAAAGCGGTTATGATTTTCTTCTTCTCTGCAACGACGCCGTTTGGGATCGCTTTGGGGATTGGTTTGTCCAAAGTGTATAGCGACACTAGTCCAACTTCTCTTATTGTGGAGGGGATTCTAAATGCTGTATCTGCTGGGCTTTTGAATTATATGGCGTTAGTTGATTTATTGGCTTCTGATTTTATGGGGCCTAAGCTGCAAGGTAGAATGAAGCTTCAGATTTGGTCTTACGTGGCAGTTTTGTTAGGGGCAGGAGGCATGTCTGTCATGGCAATTTGGGCATAG 408 0.4559 MGASENPCTIRPLIAALCFHQLFEGMGLGGCILQAEYGFNVKAVMIFFFSATTPFGIALGIGLSKVYSDTSPTSLIVEGILNAVSAGLLNYMALVDLLASDFMGPKLQGRMKLQIWSYVAVLLGAGGMSVMAIWA. 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01935 135 Pfam ZIP Zinc transporter 1 132 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Seca10g01935 135 PANTHER ZINC/IRON TRANSPORTER 1 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01935 Seca-Chr10 21805544 21805951 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g01935 1 135 Inorganic Solute Cotransporters AT1G31260 71.111 1.60e-63 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01935 K14709 - gmx:100784872 239.195