Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01925 ATGAGTGACAAGGAAAAGTTTGAGCTTGATAGAAACGAGGATCCTATGAGTTATTCTACTGGTATGCCCTCGGATTGGAGATTTGGGGGTGCCAATCTTGCAAATTCATCTGTGGGATTGGTTGCCATGGGAAGTTCTATGAATGTCAACAGAGGGGATCTAATTGGTTCTTCTTCATGTTCCTCTGCCTCAATGGTGGATTCATTTGGTCCAAACTTCTGGGACCATCCAACCAATTCCCAAAACTTGGGATTTTGTGACATTAATGTCCACAACAATGGGAGCTCTTCAAACACAACTGGAATCAGAAAAGATGGCTTTGGCTTTGGAAGAGCTGGTCAGGATCATGGATCACTTGAAATGGGTTGGAACCCTTCTAATTCTATGTTGAAAGGGGATGGTTTTTTACCAAATGGACCAGGGATATTTCCCCAGAGTTTATCTCAGTTTCCAACTGATTCTGGATTTATTGAGCGGGCTGCAAGATTCTCATGCTTCAGTGGAGGGAATTTTGGTGATATGGTGAACTCATATGAGATTCCTCAATCCATGGGGATGTATGCTGGGACAATACATGGAACAAGAGATGCTTTTGCAGGCCATGGATTAAAATCAGCAACTGGAGGACAATCTCAAGAAAGTGATCTCAATGTAGTTGAGGCTACAAAATCTGTGTCTCCATCTGTTGAGCATTTGGCTACTAAAGGAAGCCCTCTCAAGAATGATAAAAGAAGTGAAAACCGAGTTATATCTCAAGATGAAGGGAAGCAAACCCTTGTTAGGCCTGCTAATGATTCTGATAGAGCTGAATCTAGTGATGATGATGGTGGTGGCGGCCAGGATGATTCCCCAATGTTGGAGGGTACTAGTGGGGAGCCTTCTATTAAAGGACTAAACTCAAAGAAAAGGAAAAGAAGTGGACAGGATGCTGATAATGATAAAGCCAATGGAGCTCCAGAACTACACAGTGAAGGTGCAAAGGACAACTCTGAGAGTCAACAGAAGGTAGACCAACAACCAACTTCAACAGCCAAGGCTTCTGGGAAGAATGCCAAACAAGGGTCTCAAGCTTCTGATCAACCTAAGGAGGAATACATACATGTTAGGGCTCGGCGGGGTCAAGCAACAAATAGTCACAGCCTTGCAGAGAGAGTAAGATACTATGAAAAATTGCCTGTGTTGAAAAAACTTTTGGATGAAGAATTTTAA 1209 0.4285 MSDKEKFELDRNEDPMSYSTGMPSDWRFGGANLANSSVGLVAMGSSMNVNRGDLIGSSSCSSASMVDSFGPNFWDHPTNSQNLGFCDINVHNNGSSSNTTGIRKDGFGFGRAGQDHGSLEMGWNPSNSMLKGDGFLPNGPGIFPQSLSQFPTDSGFIERAARFSCFSGGNFGDMVNSYEIPQSMGMYAGTIHGTRDAFAGHGLKSATGGQSQESDLNVVEATKSVSPSVEHLATKGSPLKNDKRSENRVISQDEGKQTLVRPANDSDRAESSDDDGGGGQDDSPMLEGTSGEPSIKGLNSKKRKRSGQDADNDKANGAPELHSEGAKDNSESQQKVDQQPTSTAKASGKNAKQGSQASDQPKEEYIHVRARRGQATNSHSLAERVRYYEKLPVLKKLLDEEF. 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01925 402 MobiDBLite consensus disorder prediction 236 251 - -
Seca10g01925 402 MobiDBLite consensus disorder prediction 332 360 - -
Seca10g01925 402 MobiDBLite consensus disorder prediction 260 275 - -
Seca10g01925 402 MobiDBLite consensus disorder prediction 1 22 - -
Seca10g01925 402 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 251 386 IPR024097 GO:0006355
Seca10g01925 402 MobiDBLite consensus disorder prediction 223 365 - -
Seca10g01925 402 MobiDBLite consensus disorder prediction 297 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01925 Seca-Chr10 21683066 21687562 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g01925 56 398 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68920 38.810 1.53e-52 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01925 - - gmx:100797720 601.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g01925 10 21683066 21687562 Seca10g01925 10 21683066 21687562 ECH