Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca10g01879 | ATGAGGCCAATTTTGATGAAAGGGCACGAGAGGCCATTAACATTCCTCAAGTACAACAGAGACGGCGATCTCCTTTTCTCTTGCGCCAAGGACCACAACCCCACCGTGTGGTTCGCCGACAACGGCGAACGTTTGGGCACTTATCGAGGCCATAACGGCGCCGTTTGGTGCTGCGATGTCTCAAGAGATTCGGGACTACTCATAACTGGTAGTGCTGATCAAACTGCCAAGCTATGGAACGTTCAAACTGGTCAGCAATTGTTCACCTTCAATTTTGATTCCCCTGCTAGGTCTGTCGACTTCGCTGTCGGTGATAATCTTGCAGTTATCACTACTGACCCCTTTATGGAACTGTCTTCTGCAATTCACGTTAAACGCATTGCTAAAGATCTCACTCAACAGACAGGGGAATCTCTGCTTGTCATTAAGGGCCCTCAGGGAAGAATTAATAGAGCTATTTGGGGACCCCTCAACAAAACCATTATTAGTGCAGGGGAAGATGCTGTTATTCGAATTTGGGATTCTGAGACAGGAAAACTACTTAAAGAGTCGGACAAGGAATCTGGCCACAAAAAGACAATAACATCACTTGCAAAATCTGCTGATGGTTCACATTTTCTTACTGGCTCCCTTGATAAGTCTGCTAGGATTTGGGATACCAGAACATTGACTCTTATCAAGACATATGTGACAGAACGCCCCGTCAATGCAGTAACAATGTCACCTCTTCTTGATCACGTGGTAATTGGAGGTGGTCAGGATGCATCAGCTGTTACAACTACGGATCATCGTGCTGGCAAATTTGAAGCCAAATTCTTTGATAAGATTCTTCAAGAAGAAATTGGGGGTGTGAAAGGGCATTTTGGACCGATTAATGCACTGGCCTTTAACCCTGATGGAAAAAGGTGTATTCTTTGTTCTTCACCTCTTTTTGTGTTGCATTATGATAGATACTGGTTCAGATATTACAAAAAAGAATAA | 981 | 0.4404 | MRPILMKGHERPLTFLKYNRDGDLLFSCAKDHNPTVWFADNGERLGTYRGHNGAVWCCDVSRDSGLLITGSADQTAKLWNVQTGQQLFTFNFDSPARSVDFAVGDNLAVITTDPFMELSSAIHVKRIAKDLTQQTGESLLVIKGPQGRINRAIWGPLNKTIISAGEDAVIRIWDSETGKLLKESDKESGHKKTITSLAKSADGSHFLTGSLDKSARIWDTRTLTLIKTYVTERPVNAVTMSPLLDHVVIGGGQDASAVTTTDHRAGKFEAKFFDKILQEEIGGVKGHFGPINALAFNPDGKRCILCSSPLFVLHYDRYWFRYYKKE. | 327 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca10g01879 | 326 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 142 | 179 | - | - | |
Seca10g01879 | 326 | Pfam | WD domain, G-beta repeat | 188 | 219 | IPR001680 | GO:0005515 | |
Seca10g01879 | 326 | Pfam | WD domain, G-beta repeat | 43 | 80 | IPR001680 | GO:0005515 | |
Seca10g01879 | 326 | Pfam | WD domain, G-beta repeat | 283 | 306 | IPR001680 | GO:0005515 | |
Seca10g01879 | 326 | SUPERFAMILY | WD40 repeat-like | 4 | 308 | IPR036322 | GO:0005515 | |
Seca10g01879 | 326 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 6 | 47 | IPR001680 | GO:0005515 | |
Seca10g01879 | 326 | ProSitePatterns | Trp-Asp (WD) repeats signature. | 67 | 81 | IPR019775 | - | |
Seca10g01879 | 326 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 142 | 183 | IPR001680 | GO:0005515 | |
Seca10g01879 | 326 | SMART | WD40_4 | 277 | 316 | IPR001680 | GO:0005515 | |
Seca10g01879 | 326 | SMART | WD40_4 | 1 | 38 | IPR001680 | GO:0005515 | |
Seca10g01879 | 326 | SMART | WD40_4 | 41 | 80 | IPR001680 | GO:0005515 | |
Seca10g01879 | 326 | SMART | WD40_4 | 222 | 261 | IPR001680 | GO:0005515 | |
Seca10g01879 | 326 | SMART | WD40_4 | 135 | 174 | IPR001680 | GO:0005515 | |
Seca10g01879 | 326 | SMART | WD40_4 | 177 | 219 | IPR001680 | GO:0005515 | |
Seca10g01879 | 326 | Gene3D | - | 1 | 321 | IPR015943 | GO:0005515 | |
Seca10g01879 | 326 | CDD | WD40 | 7 | 308 | - | - | |
Seca10g01879 | 326 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 48 | 89 | IPR001680 | GO:0005515 | |
Seca10g01879 | 326 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 187 | 222 | - | - | |
Seca10g01879 | 326 | PRINTS | G protein beta WD-40 repeat signature | 67 | 81 | IPR020472 | - | |
Seca10g01879 | 326 | PRINTS | G protein beta WD-40 repeat signature | 206 | 220 | IPR020472 | - | |
Seca10g01879 | 326 | PRINTS | G protein beta WD-40 repeat signature | 161 | 175 | IPR020472 | - | |
Seca10g01879 | 326 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 187 | 228 | IPR001680 | GO:0005515 | |
Seca10g01879 | 326 | ProSitePatterns | Trp-Asp (WD) repeats signature. | 161 | 175 | IPR019775 | - | |
Seca10g01879 | 326 | Hamap | Eukaryotic translation initiation factor 3 subunit I [EIF3I]. | 1 | 315 | IPR027525 | GO:0003743|GO:0005737|GO:0005852 | |
Seca10g01879 | 326 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 48 | 85 | - | - | |
Seca10g01879 | 326 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT I | 1 | 304 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca10g01879 | Seca-Chr10 | 20896777 | 20899373 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca10g01879 | 1 | 320 | Eukaryotic Initiation Factors Gene Family | AT2G46290 | 75.309 | 0.0 | 508 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca10g01879 | K03246 | - | gmx:100793485 | 590.112 |