Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01878 ATGGGCAAGAGAGGAACAAGGTTACCAGGCTTCTGCCTGAACAGAATTAGGCCTCATGCTCGGGTGCGTTCCCCACCTATACAAGCCAAGCATGACACGAGTGCCACTAAAATTGATCAAAAAACTGAGAATTCCTGCAGTTCTTGTGAGGAGAAATCTGATGATGGACTCAAACCTGGGTCTGTAATTGGTAGAAAGATCATGATTGTGGTTGATTCTAGCCTTGAAGCCAAAGGTGCTGTCCAATGGGCACTCACTCACACAGTTCAGAACCAGGACACCATAGTTCTTCTTCATGTCCTGAAGCCTTCTAATTCTAAACAAGCCATTGATGAAGCTTCCAGCAAGGAGATAGCTCCAAAGGCTTATGAACTTGCTTCTTCCTTCAAGAATATGTGTCATGTGAAGAGGCCTGAGGTGAGTTTAGCTCCCTTAGGCTGTATGGTACAAATTGAGATTGCAGTAATAGAAGGAAAAGAAAAAGGGCCAAAAATAGTGGAGGAAGCCAAGAAACAAGGCGTGGCACTTCTGGTTTTGGGGCAGAAGAAGAGGTCCACAACATGGCGTCTTCTGATGATGTGGGCAGGGCACAGAGTGAGTGGTGGGGTGGTAGAGTATTGCATCCAGAATGCACATTGCATGGCAATTGCTGTGAGAAGAAAAGGCAAGAAAATTGGAGGCTATATGATTACTACTAAGCGTCACAAAGATTTCTGGCTCTTAGCTTAA 729 0.4513 MGKRGTRLPGFCLNRIRPHARVRSPPIQAKHDTSATKIDQKTENSCSSCEEKSDDGLKPGSVIGRKIMIVVDSSLEAKGAVQWALTHTVQNQDTIVLLHVLKPSNSKQAIDEASSKEIAPKAYELASSFKNMCHVKRPEVSLAPLGCMVQIEIAVIEGKEKGPKIVEEAKKQGVALLVLGQKKRSTTWRLLMMWAGHRVSGGVVEYCIQNAHCMAIAVRRKGKKIGGYMITTKRHKDFWLLA. 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01878 242 MobiDBLite consensus disorder prediction 23 54 - -
Seca10g01878 242 Pfam Universal stress protein family 65 219 IPR006016 -
Seca10g01878 242 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 1 242 - -
Seca10g01878 242 Gene3D HUPs 64 226 IPR014729 -
Seca10g01878 242 CDD USP_Like 66 218 - -
Seca10g01878 242 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 65 223 - -
Seca10g01878 242 MobiDBLite consensus disorder prediction 34 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01878 Seca-Chr10 20878754 20880875 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01878 - - gsj:114387774 414.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g01878 10 20878754 20880875 Seca10g01878 10 20878754 20880875 ECH