Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01860 ATGAGCATCATGTCAATACCAGAAATAGTGTATTATGTACTGGCTTTGGCGTTTTGTGCATTCTCTGTAGTGCTCAAGTGGAATGAGTTAAGGTACAGTAGGAAAGGAATGCCACCAGGAACTATGGGTTGGCCTATTTTTGGTGAGACTGCAGGGTTTCTCAAACAAGGACCAGATTTCATGAAAAGCAAGAGAGCAAGGTATGGAAATCTGTTTAAGTCTCATGCATTAGGCTCTCCTGTTGTTATCAGCATGGATCCAGAACTCAACAGATACATCCTCCAGAATGAAGCAAAAGGTCTAGTTCCAGGGTACCCTGTATCCATGAGGAATATACTAGGGAATGGCAACATTGCTGAAGTTCATGGTGCTCTTCATAAACGTATTAGAGGGTCAATTTTATCATTCATTGGTCCAGCTGCAATTAGAGGTCATCTTTTGCCTGAAGTTGACAAGTTTATGCAGTCTTTCCTTGACAATTGGGCTGGTAAAACCATTGATATTCAACACAGAACCAAACAGATGGCATTCTTTGTATCAATGAAATTGATTGTAGAAAATGAACCAAGTCCTTTCCATGAGGCTTTTAAAGCTACATTTGATAACATAGTGTCAGGAACGTTTTCTCTGCCTATTAAAATTCCTGGCACTAATTACTTTCGAGGACTCCAGACAAGGAAAAAAGTGGTTGCAACACTTAAAGAGGTTTTAACAAAGAGAAGATCTTCTTTGGCTACTCATGCTGACATTCTAGATCAGCTTATGGATCTCAAATGCAAACTCAATGATGAAGAAATAATTGATCAAATAATCACATTCTTATACTCAGGTTATGAAACTGTATCAACTACTACAATGATGGCTGTCAAATACCTCCATGATAATCCTAGAGTTCTTGAAGAAGTCAGGGTGAGTCACAGCTTTTCATCAGAGCATTTTGCAATCAAAGAAAGGAAAAGACCAGAGGATGTAGTTAGCTGGGATCACTATAAGCATATGGTTTATACTCGTGCGGTGATTTTTGAAACCTTGAGATTGGCTAACATTGTTAATGGGGTATTGAGGAAGACCACAAAGGATGTTGAACTGAATGGATTTACCATTCCTCAGGGATGGAGGGTTTATGTGTACACAAGGGAGACCAATTGTGATCCCTCTCTCTATCCAGAGCCTTTCAGTTTTAAACCCTCAAGATGGCTGGAATATGAAATAAATGCAATGCAGGAGAAAGGCTTGGAGTCTCATAACCATAACATGTTATTTGGAGGAGGAGTTAGGCTATGTCCTGGAAAGGAACTAGGCATAGTTATAATCTCTCTTTTCCTTCACTATTTTGTCACTAAATACAGGTGGGATGTAGAGGAAAACGAACTTCGGAAGTTCCCTAGAGTTGAAGCACCAAATGGACTACACATAAGAGTCGCCGCATACTAG 1434 0.3968 MSIMSIPEIVYYVLALAFCAFSVVLKWNELRYSRKGMPPGTMGWPIFGETAGFLKQGPDFMKSKRARYGNLFKSHALGSPVVISMDPELNRYILQNEAKGLVPGYPVSMRNILGNGNIAEVHGALHKRIRGSILSFIGPAAIRGHLLPEVDKFMQSFLDNWAGKTIDIQHRTKQMAFFVSMKLIVENEPSPFHEAFKATFDNIVSGTFSLPIKIPGTNYFRGLQTRKKVVATLKEVLTKRRSSLATHADILDQLMDLKCKLNDEEIIDQIITFLYSGYETVSTTTMMAVKYLHDNPRVLEEVRVSHSFSSEHFAIKERKRPEDVVSWDHYKHMVYTRAVIFETLRLANIVNGVLRKTTKDVELNGFTIPQGWRVYVYTRETNCDPSLYPEPFSFKPSRWLEYEINAMQEKGLESHNHNMLFGGGVRLCPGKELGIVIISLFLHYFVTKYRWDVEENELRKFPRVEAPNGLHIRVAAY. 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01860 477 PRINTS E-class P450 group IV signature 428 446 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g01860 477 PRINTS E-class P450 group IV signature 59 82 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g01860 477 PRINTS E-class P450 group IV signature 333 349 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g01860 477 PRINTS E-class P450 group IV signature 412 428 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g01860 477 PRINTS E-class P450 group IV signature 382 400 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g01860 477 PRINTS P450 superfamily signature 338 349 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g01860 477 PRINTS P450 superfamily signature 276 293 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g01860 477 PRINTS P450 superfamily signature 428 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g01860 477 PRINTS P450 superfamily signature 419 428 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g01860 477 PANTHER CYTOCHROME P450 26 35 453 - -
Seca10g01860 477 Pfam Cytochrome P450 38 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g01860 477 CDD CYP90-like 65 474 - -
Seca10g01860 477 Gene3D Cytochrome P450 28 476 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g01860 477 SUPERFAMILY Cytochrome P450 30 458 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g01860 477 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 421 430 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01860 Seca-Chr10 20647613 20651169 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g01860 85 477 Cytochrome P450 AT5G38970 54.523 1.55e-150 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01860 K09590 - gmx:100818004 647.891