Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01852 ATGGCTCTCTCTGGTGGTGATGAAAATAGAGGAGAGTTGAGGATTCATGAGAGTTTAGATGAGCTAAGGACTGATTTGGCAGACTATATTGCTGAATTATCAGAGGCATCGGTGAAGGAGCGGGGAGTCTTTGCCATTGCTTTATCTGGTGGTTCTCTCATTGGCTTAATGGGAAAACTCTGTGAAACTCCTTATAACAAGACTGTGGACTGGTCCAAGTGGTATATCTTCTGGGCTGATGAGCGTGTTGTTGCAAAAAACCATGCTGATAGCAATTATAAGCTTGCTAAAGATGGCCTTCTGTCTAAGGTACCTATTGTCCCCAGTCATGTGCATTCTATTAATGATTCCGTGTCAGCAGAAGAAGCTGCTGATGATTATGAGTTTGTCATCCGACAGTTAGTGAAAACCCGTATCGTCAGTGTGTCTGAGATTAGTGACTGCCCAAAGTTTGATCTCATTTTGCTTGGACTGGGTCCAGATGGTCATGTTGCCTCTTTATTTCCTAATCACTCAGTACTCAATGAAAGGGAAGAATGGGTAACTTTCATTACTGACTCTCCCAAACCTCCTCCTGAGAGAATCACATTCACCTTGCCTGTTATCAATTCTGCATCCAATGTAGCAGTGGTCGTCACAGGTGACAGCAAAGCAGAAGCTGTACACTTGGCAATAGATGATGTTGGACCTGACTGCCCATTAATACCTGCAAGGATGGTCCAACCAGCTATGGGGAAGTTGGTGTGGTTTTTGGATAAGCCGGCTGCCTCAAAACTTGAAGATTCCAATTTGAACAAGTAG 801 0.4395 MALSGGDENRGELRIHESLDELRTDLADYIAELSEASVKERGVFAIALSGGSLIGLMGKLCETPYNKTVDWSKWYIFWADERVVAKNHADSNYKLAKDGLLSKVPIVPSHVHSINDSVSAEEAADDYEFVIRQLVKTRIVSVSEISDCPKFDLILLGLGPDGHVASLFPNHSVLNEREEWVTFITDSPKPPPERITFTLPVINSASNVAVVVTGDSKAEAVHLAIDDVGPDCPLIPARMVQPAMGKLVWFLDKPAASKLEDSNLNK. 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01852 266 FunFam Probable 6-phosphogluconolactonase 8 260 - -
Seca10g01852 266 NCBIfam 6-phosphogluconolactonase 15 259 IPR005900 GO:0005975|GO:0006098|GO:0017057
Seca10g01852 266 PANTHER 6-PHOSPHOGLUCONOLACTONASE 8 260 IPR039104 -
Seca10g01852 266 Coils Coil 19 39 - -
Seca10g01852 266 CDD 6PGL 20 251 IPR005900 GO:0005975|GO:0006098|GO:0017057
Seca10g01852 266 Pfam Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 19 249 IPR006148 GO:0005975
Seca10g01852 266 SUPERFAMILY NagB/RpiA/CoA transferase-like 13 260 IPR037171 -
Seca10g01852 266 Gene3D - 9 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01852 Seca-Chr10 20581126 20588873 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01852 K01057 - gmx:100806593 485.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g01852 10 20581126 20588873 Seca10g01852 10 20581126 20588873 ECH