Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01851 ATGGCAATGGCCGCAAGAGGTATGAACACGATGAGGAATATTGTCGGTGCTGCTCTTCGCCTACGCTCTCACACTCATAACCCTTTTCTCTCTTCACCAAATTCCCACCTCCACGCCTTCTCCTCCTTCTCTCGCCATACTCCAGTTGTAGGTGAGACAAGTGATGAAGGTGCAACCACAGATGGATGGGAAGAAGAAGACGAGGCTGAGCCTAAGCTTGGTGATGGGGGCAGTGGTGGTGGAATTGCCTTGCAAAATGTTCCTTGGGGTCAGCGAGCCTTCTCTATTGCTGAGGAGGTCCTTATGCAGTTCAGTGAGGACATCAAACTATATGCTTTCAAGACTACACCTCGTGGATATGTTTATGTGAGATTGGACAAATTAACAAATGAATATGGGTGTCCAAGCATGGAAGAGCTTGAAAGCTACAATCAAGAATACAAGAAAAGATTAGATGAAGTTGGAGCACTCGGAGAGATACCTGATGATTTGGCTCTTGAGGTTTCATCCCCAGGCGCTGAGAGGATACTAAAAGTGCCGGATGATCTTAGTCGATTCAAAGACATGCCTATGAGAGTGTGCTATACAGAATATATAGAGTCCAATTGCACAGAAAGGGATGGAATTTTCTTGTTAGATTCTATAGAAAAAGACTCAGAGATATGTGTTTGGAAGTTGGCAGACGTTAGAGAGAATAGAGACCCTCTAAGAAAAGGCAGGCCTTTAAGTCGTAAGCAGAAGGATTGGAGATTAAAATTGCCATTTAGCTTGCATAGAATGGTAACTCTGTACCTTGAATATTTGTAA 807 0.4387 MAMAARGMNTMRNIVGAALRLRSHTHNPFLSSPNSHLHAFSSFSRHTPVVGETSDEGATTDGWEEEDEAEPKLGDGGSGGGIALQNVPWGQRAFSIAEEVLMQFSEDIKLYAFKTTPRGYVYVRLDKLTNEYGCPSMEELESYNQEYKKRLDEVGALGEIPDDLALEVSSPGAERILKVPDDLSRFKDMPMRVCYTEYIESNCTERDGIFLLDSIEKDSEICVWKLADVRENRDPLRKGRPLSRKQKDWRLKLPFSLHRMVTLYLEYL. 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01851 268 Coils Coil 137 157 - -
Seca10g01851 268 Hamap Ribosome maturation factor RimP [rimP]. 91 267 IPR003728 GO:0042274
Seca10g01851 268 PANTHER OSJNBA0006B20.18 PROTEIN 43 267 - -
Seca10g01851 268 MobiDBLite consensus disorder prediction 48 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01851 Seca-Chr10 20549620 20553544 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01851 - - lja:Lj2g3v1242270.2 433.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g01851 10 20549620 20553544 Seca10g01851 10 20549620 20553544 ECH