Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01849 ATGTCGCTAGAGCTTCACCTTTTGTTCTCCCCTTACCTGCTTCAGCCACCTTTTTTCACTCTCCAAGCTGCCATATGCATTCTGTTGTTCACCTTCGCCTTCATGTTCTGGCTCGCTCCCGGCGGGCTTGCTTGGGCCCTGTGCAAGTCTTCGGCCCGGTCTGTAATCCCGGGCCCTTCCGTTTCCAATCTGATTGGGCTTTTCTCAGGCCAGACCCCTCACCGGGCTCTTGCTAAACTCGCCCGTAGCTACCGGGCTGAGTCGCTGATGGCCTTCTCTGTCGGGCTGACTCGGTTCGTTATCTCAAGCGAACCTGAAACTGCTAAGGAGATTCTTTCTAGCTCGGGCTTTGGTGACAGGCCTGTGAAGGAATCGGCTTATGAGCTTCTGTTTCACAGAGCAATGGGCTTTGCACCATACGGAGAGTACTGGAGGAACCTGAGGAGGATTTCTTCCACCCACTTGTTTTGCCCCAAGAGGATCTTAAACTTTGGAGGTTTCAGGAGCGAGGTGGGGTTAAAGATGGTGGAGCGAGTGAGGCTTTTGATGGCTGAAACTGGACGAGTTGAGGTGAAAAAGATGCTTCATTTTGGGTCCCTGAACAATGTGATGATGACTGTGTTTGGTAAGAGTTACGAGTTCTTTGATGGTGATGGTGCTGAGCTTGAGGAATTGGTCAGCGAAGGGTACGAGTTGTTGGGTGTGTTTAACTGGAGTGACCATTTACCTCTTCTGGGGTGGTTGGACTTGCAAGGAGTGAGGAAAAGGTGCAGGGCTTTGGTGAAAAAGGTAAATGTTTTTGTTGGAAAGATCATAGAGGAGCACAGGATGAAAAGGGTGTCTGGTGGAAGCATAGTGGGTGATTTCGTTGATGTGTTGCTTGATTTGGAGAAGCAAGATAAGCTCAGTGATTCTGATATGGTTGCAGTTCTTTGGGAAATGCTATTTAGAGGAACTGACACTGTGGCTATTACGCTGGAGTGGATTTTGGCTAGAATGGTTCTTCACCCTGAGATACAAGCCAAGGCCCAGGAAGAGATTGATGCTGCTGTTGGAAAATCAAGGCTTGTTTCTGATGAGGATCTTCCTAAACTTCGTTATGTGCAGTGCATTGTGAAGGAAGCTATGAGGGTGCACCCACCCGGGCCTCTGTTGTCATGGGCTCGCTTAGCTGTGCAGGATGTGTGGGTAGGTGACAAGCTTGTTCCTGCAGGCACAACTGCCATGGTGAACATGTGGGCCATAACGCATGACGAGAAGGTGTGGGCAGAGCCAGAGGAGTTCAAGCCTGAGAGGTTCATGAAAGAGGAAGTGAACATAATGGGATCTGATTTGAGGTTGGCTCCTTTTGGGTCTGGAAGAAGGGTCTGTCCTGGGAAGACCATGGGCTTAGCCTCTATTCACCTCTGGCTTGCACAATTGCTTCAAAGCTTCAAATGGGTTCCCTCTGAGGATGCCCCTGTTGACTTGTCTGAGTGCCTTAAGCTGTCTATGGAGATGAAAAGCCCACTGGTGTGCAAGGCTGTCCCTAGGGCTGATGCTTAA 1545 0.4997 MSLELHLLFSPYLLQPPFFTLQAAICILLFTFAFMFWLAPGGLAWALCKSSARSVIPGPSVSNLIGLFSGQTPHRALAKLARSYRAESLMAFSVGLTRFVISSEPETAKEILSSSGFGDRPVKESAYELLFHRAMGFAPYGEYWRNLRRISSTHLFCPKRILNFGGFRSEVGLKMVERVRLLMAETGRVEVKKMLHFGSLNNVMMTVFGKSYEFFDGDGAELEELVSEGYELLGVFNWSDHLPLLGWLDLQGVRKRCRALVKKVNVFVGKIIEEHRMKRVSGGSIVGDFVDVLLDLEKQDKLSDSDMVAVLWEMLFRGTDTVAITLEWILARMVLHPEIQAKAQEEIDAAVGKSRLVSDEDLPKLRYVQCIVKEAMRVHPPGPLLSWARLAVQDVWVGDKLVPAGTTAMVNMWAITHDEKVWAEPEEFKPERFMKEEVNIMGSDLRLAPFGSGRRVCPGKTMGLASIHLWLAQLLQSFKWVPSEDAPVDLSECLKLSMEMKSPLVCKAVPRADA. 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01849 514 SUPERFAMILY Cytochrome P450 56 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g01849 514 Gene3D Cytochrome P450 48 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g01849 514 PRINTS P450 superfamily signature 317 334 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g01849 514 PRINTS P450 superfamily signature 448 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g01849 514 PRINTS P450 superfamily signature 370 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g01849 514 PRINTS P450 superfamily signature 457 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g01849 514 FunFam Cytochrome P450 78A5 48 511 - -
Seca10g01849 514 Pfam Cytochrome P450 58 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g01849 514 CDD CYP78 85 504 - -
Seca10g01849 514 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 450 459 IPR017972 GO:0005506|GO:0016705
Seca10g01849 514 PRINTS E-class P450 group I signature 306 323 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g01849 514 PRINTS E-class P450 group I signature 198 216 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g01849 514 PRINTS E-class P450 group I signature 447 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g01849 514 PRINTS E-class P450 group I signature 369 387 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g01849 514 PRINTS E-class P450 group I signature 326 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g01849 514 PRINTS E-class P450 group I signature 457 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g01849 514 PRINTS E-class P450 group I signature 411 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g01849 514 PANTHER CYTOCHROME P450 78A7-RELATED 19 511 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01849 Seca-Chr10 20503477 20505542 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g01849 19 511 Cytochrome P450 AT1G13710 66.335 0.0 665
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01849 K20619 - gmx:100783602 768.844