Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01842 ATGGACGAAACACAAGGCCAGCACTATTCTTCCAGCCTACCTGAGCCTGCCTTATCTCAAGACAGTAGTGAGAGGTCTTATTTCAATGGGCAGCAAGTGAATCGTGGGACTGGTATATCAGGCTTGAAGAAGAGAGGTCATGGAAGTCGCTCTTGGATAAAAATTGGTCAGGATGGAGATTCCAAGACTGTGATGCTTGACAAGGCTACTATTATGAGACATTGTTCGTTGCCTTCTAGAGATCTCCGACTATTGGATCCGATGTTCATTTATCCTTCTACAATATTAGGACGGGAGAAGGCTATTGTAGTCAACCTTGAGCAAATCCGATGTATAATCACTGCTGATGAGGTCATCCTGATGAATTCATTGGATGGTAGTGTTGGTCAGTACAGGTCAGAATTATGCAACCGGCTTCAGAAAGAAAAGGCTGATGATCTACCTTTTGAATTTAGGGCACTGGAGTTGGCTCTGGAATTGACATGCACATCTTTGGATGCTCAGGTAAAAGAACTGGAAATGGAAATATATCCCGTGCTAGATGAACTAGCCTCATCTATCAGTACACTCAATCTGGAACGTGTTCGAAGATTTAAAGGTCACCTCCTCGCCTTGACTCAGCGAGTTCAGAAGGTTGTCCGTGATGAAATAGAACATCTCATGGATGATGATGGTGACATGGCTGAGATGTGCCTGACCGAGAAAAGGAGAAGATCAGACGCTTACCCTTCAAATGATTATTTTCAAACTCGTACATCTGGTGGAGTGATTTCAAAATCAGCTCCTGCTTCACCAGAGCGATCAATTAGTGGGGTCCAGATGTTGCAGAGGGCTTTCAGCAGCATTGCAAATTCTAGTAAACATGGTAGTTCGATGGGATCGTCTGATATTGGGGAAAGGATTGAACCACTGGAAATGTTGCTGGAAGCATACTTTATCGTCATTGATAATACTCTTAACACGTTATTATCGCTCAAAGAATACATTGATGACACAGAAGATTTTATCAACATAAAATTGGGAAATATTCAAAACCACCTAATACAGTTTGAGTTGCTTCTTACAGCAGCTATGTTGGTAGCTGCAGTTTTTGCTGCTGTGACAGCAGTATTTGGAATGAACTTTGAAACAACAGTTTTTGACTATCCATCTGGATTCAATTGGGTTTTGGTAATTACTGGAATTGCTTGTGCATCATTGTATTTCTGCTTCCTATTCTATTTTAGGTACAAGAAAGTGCTTGCAGCATAA 1251 0.4157 MDETQGQHYSSSLPEPALSQDSSERSYFNGQQVNRGTGISGLKKRGHGSRSWIKIGQDGDSKTVMLDKATIMRHCSLPSRDLRLLDPMFIYPSTILGREKAIVVNLEQIRCIITADEVILMNSLDGSVGQYRSELCNRLQKEKADDLPFEFRALELALELTCTSLDAQVKELEMEIYPVLDELASSISTLNLERVRRFKGHLLALTQRVQKVVRDEIEHLMDDDGDMAEMCLTEKRRRSDAYPSNDYFQTRTSGGVISKSAPASPERSISGVQMLQRAFSSIANSSKHGSSMGSSDIGERIEPLEMLLEAYFIVIDNTLNTLLSLKEYIDDTEDFINIKLGNIQNHLIQFELLLTAAMLVAAVFAAVTAVFGMNFETTVFDYPSGFNWVLVITGIACASLYFCFLFYFRYKKVLAA. 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01842 416 CDD Mrs2_Mfm1p-like 52 413 IPR039204 -
Seca10g01842 416 Gene3D Magnesium transport protein CorA, transmembrane region 354 413 - -
Seca10g01842 416 MobiDBLite consensus disorder prediction 1 38 - -
Seca10g01842 416 FunFam Magnesium transporter MRS2-1 40 123 - -
Seca10g01842 416 MobiDBLite consensus disorder prediction 1 55 - -
Seca10g01842 416 Gene3D Magnesium transport protein CorA, transmembrane region 127 347 - -
Seca10g01842 416 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 17 414 IPR039204 -
Seca10g01842 416 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 353 405 IPR045863 -
Seca10g01842 416 Gene3D - 40 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01842 Seca-Chr10 20349515 20354412 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g01842 1 414 MRS2 Gene Family AT2G03620 65.248 2.64e-180 507
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01842 K16075 - gmx:100803935 687.952