Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01816 ATGTCCGCTGAAAAAGAGAGAGAGACCCAGGTTTACTTGGCCAAGCTTGCTGAACAGGCCGAGAGATATGAAGAAATGGTTGAATGTATGAAGAAAGTGGCAAAACTTGATCTTGATCTAACTGTGGAAGAGAGGAACTTGCTCTCAGTGGGATATAAAAATGTCATTGGTGCACGGAGGGCCTCTTGGCGTATTATGTCCTCAATTGAGCAGAAGGAAGAGTCTAAGGGAAATGAACACAATGTTAAACTGATCAAGAGTTACTGCCAGAAGGTTGAGGAGGAACTCTCCAAAATTTGCGGGGACATTCTGACAATTATAGACCAGCATCTGATTCCTTCTTCCACCTCAGCAGAAGCTAATGTTTTCTACTATAAGATGAAAGGTGATTATTTCCGGTATCTTGCTGAGTTCAAGACCGACCAAGAAAGGAAAGAGGCCGCTGAGCAGTCACTGAAAGGATATGAAGCTGCTTCAGCCACTGCAAACACAGATCTTCCATCAACACATCCAATCCGCCTTGGACTTGCACTCAACTTCTCTGTCTTTTATTATGAGATCATGAACTCTCCTGAAAGGCAAGTTATTGAGTTGGACACGTTGAGTGAGGAATCATACAAGGACAGCACTTTAATCATGCAATTGTTGAGAGACAACCTTACACTCTGGACCTCCGATTTGCCAGAGGATGGAGGTGAGGAGAACACGAAAGCTGAAGAATCCAAACCTGCTGAGCCCGAGAATTTGATAATCTTCTATTTTGCAGCATTGATAAGGTTCCTTTGGATCTCTGGCCCTGATTCAGTAGTCAAATATCTAAGGTACTCTGCAAAGAGGGCATTTTTCAGCTTTTCTTGCAATGGATTTGGACCGGACAATGTGGACTGTGGCCACTTCATAATTCTTGGCCCCTCTTAA 918 0.4357 MSAEKERETQVYLAKLAEQAERYEEMVECMKKVAKLDLDLTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKGNEHNVKLIKSYCQKVEEELSKICGDILTIIDQHLIPSSTSAEANVFYYKMKGDYFRYLAEFKTDQERKEAAEQSLKGYEAASATANTDLPSTHPIRLGLALNFSVFYYEIMNSPERQVIELDTLSEESYKDSTLIMQLLRDNLTLWTSDLPEDGGEENTKAEESKPAEPENLIIFYFAALIRFLWISGPDSVVKYLRYSAKRAFFSFSCNGFGPDNVDCGHFIILGPS. 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01816 305 SMART 1433_4 7 237 IPR023410 -
Seca10g01816 305 ProSitePatterns 14-3-3 proteins signature 1. 45 55 IPR023409 -
Seca10g01816 305 PANTHER 14-3-3 PROTEIN 7 226 IPR000308 -
Seca10g01816 305 Pfam 14-3-3 protein 13 224 IPR023410 -
Seca10g01816 305 Coils Coil 13 33 - -
Seca10g01816 305 ProSitePatterns 14-3-3 proteins signature 2. 206 225 IPR023409 -
Seca10g01816 305 Gene3D - 1 238 IPR036815 -
Seca10g01816 305 PRINTS 14-3-3 protein zeta signature 39 68 IPR000308 -
Seca10g01816 305 PRINTS 14-3-3 protein zeta signature 119 141 IPR000308 -
Seca10g01816 305 PRINTS 14-3-3 protein zeta signature 88 112 IPR000308 -
Seca10g01816 305 PRINTS 14-3-3 protein zeta signature 181 207 IPR000308 -
Seca10g01816 305 PRINTS 14-3-3 protein zeta signature 154 180 IPR000308 -
Seca10g01816 305 SUPERFAMILY 14-3-3 protein 6 226 IPR036815 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01816 Seca-Chr10 20062923 20065633 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g01816 3 242 14-3-3 family AT1G26480 80.876 2.30e-146 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01816 - K06630 gmx:100529130 462.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g01816 10 20062923 20065633 Seca10g01816 10 20062923 20065633 ECH