Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01809 ATGGAAGACAAGAACAGAACACCTTCCAATCCTGCAACCGCCGCTGAGTCAAGCTGGACGCTCGGTGGCGATGACTCCGCCGGCGCCTATTTCTTCTCCGCTGACAGGGACAGAAGCATACTCAGCGACTTCGGCTGGAACCTCGAGCCGGACCGGATCGGCGCCGACGATGGATTGTGGCTTCCTTCTCACGCCGCTCCGACCGGTTCGATCGAACCGGAAGCGGCGGCTGCGACATCGTCGTTCAGGTCGAATAACCAGTCGGTTTCTTCCAGCTCCAGCGAGGATCCGCCGGAGAAGTCCACCGTCTCCGATGAGAAACCGCCTGAGATACCGAGTAAAAGTAAGAAGAAGGGGCAAAAGCGAATACGGCAACCGCGGTTTGCATTTATGACCAAGAGTGAAGTTGATCATCTTGAGGATGGCTACAGATGGCGGAAGTATGGACAGAAGGCTGTTAAAAATAGTCCATTCCCTAGGAGCTACTATCGATGTACAAACAGCAAATGCACGGTGAAGAAAAGGGTTGAACGCTCCTCCGAGGACCCAACAATTGTGATTACTACATATGAAGGGCAACACTGTCATCATACCGTTGGATTTCCTCGAGGGGGGATCATAAGCCATGAAGCTGCCTTTGCCGGTAGCCAATTGGCTCCTGCGATGTCACAGTTGTATTATCCAGTTCAATTACCAAGAGCTAACACTTTTAGCAGTATTTCTCAGCCTTGCCAACCACAGGATGAAGCTGGAGGATCCAGCGCTACAATCCCAGCCGATGCATCGCCACAGCCTCCAACGGATGAAGGACTGCTTGGAGATATTGTACCCCCGGGAATGCGCCACAGATGA 852 0.5293 MEDKNRTPSNPATAAESSWTLGGDDSAGAYFFSADRDRSILSDFGWNLEPDRIGADDGLWLPSHAAPTGSIEPEAAAATSSFRSNNQSVSSSSSEDPPEKSTVSDEKPPEIPSKSKKKGQKRIRQPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTNSKCTVKKRVERSSEDPTIVITTYEGQHCHHTVGFPRGGIISHEAAFAGSQLAPAMSQLYYPVQLPRANTFSSISQPCQPQDEAGGSSATIPADASPQPPTDEGLLGDIVPPGMRHR. 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01809 283 ProSiteProfiles WRKY domain profile. 134 199 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca10g01809 283 SMART WRKY_cls 139 198 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca10g01809 283 MobiDBLite consensus disorder prediction 74 98 - -
Seca10g01809 283 Pfam WRKY DNA -binding domain 140 196 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca10g01809 283 MobiDBLite consensus disorder prediction 99 116 - -
Seca10g01809 283 MobiDBLite consensus disorder prediction 1 26 - -
Seca10g01809 283 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 84 204 IPR044810 GO:0003700
Seca10g01809 283 FunFam WRKY transcription factor 57 125 199 - -
Seca10g01809 283 Gene3D WRKY domain 126 192 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca10g01809 283 MobiDBLite consensus disorder prediction 238 261 - -
Seca10g01809 283 MobiDBLite consensus disorder prediction 55 127 - -
Seca10g01809 283 MobiDBLite consensus disorder prediction 238 283 - -
Seca10g01809 283 SUPERFAMILY WRKY DNA-binding domain 131 197 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01809 Seca-Chr10 19959009 19966793 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g01809 8 282 WRKY Transcription Factor Family AT1G69310 53.000 1.18e-80 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Seca10g01809 WRKY 1.7e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01809 - - gmx:100170676 420.624