Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca10g01770 | ATGTTAGGCGGTGGAAATGGAGACCGACCACCGTCTAATAAAGAGGCGGCGGCTACTGGCGGCGGCGGAGGGGGACCACCGCCCCGGCCCACCATCACTCTGCCGCCACGTACGGACACCCTTTTCAACGGTGGTTTCAGCCCTGGTCCCATGACTCTGCTTTCTAATTTCCTCTCCGACGGTGACGACTGCAAGTCTTTCTCGCAGCTCCTCGCCGGCGCCATGGCGTCTCCGGTGGCGGCCACCGCCGGCTTGCTCGACTCACCTGGCTTCTTTTCACCGCAGGTGTCCTTTGGAATGACACACCAGCAAGCACTAGCACAGGTCTCAGCTCAATCTGTGCAGTCCAACTCAAACATGCATATCCAAGCTGAACATTCATTGTCTGTATCAGTACCACCTGCTACCTCATTGACACAGGTTCCTGCATCTATTTCCAATACTTCACAACAGCTGATGCCACGCTTAACAGCAGACTCTCAGGCAGCAATGACAGAATCCACTGATTACTCTCTCTCTGAACAAAGATTGCAGTCTTCTTCAGTGAATGTTGATAAGCCTGCTGATGATGGCTACAACTGGAGGAAGTATGGTCAGAAACAGGTTAAGGGTAGTGAGTTTCCTCGAAGTTATTATAAGTGCACACATCCTAAGTGTCCTGTCAAGAAAAAAGTTGAGCGTTCACTTGAAGGTCATGTAACTGCAATTATTTATAAAGGAGAGCACAACCATCAACGCCCTAATCCTAACAAACGCTCAAAAGACACCATAACTTCAAATGACAATTCAAATATGCAACAAGGGAATGCTGATTCAACATCTCAAGGGATGACTACAAACTCAATGTCTAAGATGGATCCAGAATCTAGTCAGGCAACAGCTGAACGTGTATCAGGAACAAGTGACAGTGAGGAAGTTGGTGATCATGGAACAGAAGTGGATGATAAAATTGTTGAGCCTGACCCCAAGAGGAGGTAA | 978 | 0.4867 | MLGGGNGDRPPSNKEAAATGGGGGGPPPRPTITLPPRTDTLFNGGFSPGPMTLLSNFLSDGDDCKSFSQLLAGAMASPVAATAGLLDSPGFFSPQVSFGMTHQQALAQVSAQSVQSNSNMHIQAEHSLSVSVPPATSLTQVPASISNTSQQLMPRLTADSQAAMTESTDYSLSEQRLQSSSVNVDKPADDGYNWRKYGQKQVKGSEFPRSYYKCTHPKCPVKKKVERSLEGHVTAIIYKGEHNHQRPNPNKRSKDTITSNDNSNMQQGNADSTSQGMTTNSMSKMDPESSQATAERVSGTSDSEEVGDHGTEVDDKIVEPDPKRR. | 326 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca10g01770 | 325 | MobiDBLite | consensus disorder prediction | 165 | 193 | - | - | |
Seca10g01770 | 325 | Pfam | WRKY DNA -binding domain | 189 | 245 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Seca10g01770 | 325 | SMART | WRKY_cls | 188 | 246 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Seca10g01770 | 325 | MobiDBLite | consensus disorder prediction | 165 | 186 | - | - | |
Seca10g01770 | 325 | MobiDBLite | consensus disorder prediction | 1 | 46 | - | - | |
Seca10g01770 | 325 | MobiDBLite | consensus disorder prediction | 301 | 325 | - | - | |
Seca10g01770 | 325 | MobiDBLite | consensus disorder prediction | 252 | 300 | - | - | |
Seca10g01770 | 325 | FunFam | WRKY transcription factor | 176 | 248 | - | - | |
Seca10g01770 | 325 | MobiDBLite | consensus disorder prediction | 237 | 325 | - | - | |
Seca10g01770 | 325 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 86 | 324 | IPR044810 | GO:0003700 | |
Seca10g01770 | 325 | ProSiteProfiles | WRKY domain profile. | 189 | 247 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Seca10g01770 | 325 | Gene3D | WRKY domain | 173 | 248 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Seca10g01770 | 325 | SUPERFAMILY | WRKY DNA-binding domain | 186 | 247 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca10g01770 | Seca-Chr10 | 19608005 | 19611243 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca10g01770 | 29 | 71 | WRKY Transcription Factor Family | AT2G03340 | 65.957 | 3.09e-11 | 62.4 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Seca10g01770 | WRKY | 1.4e-25 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca10g01770 | - | - | gmx:100127369 | 457.218 |