Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca10g01769 | ATGATGGGTATAGATGGCGAAAATATGGGCAGAAAGTTGTCAAAGGCAACCCTTATCCTAGGTTGTAATGTCCGGAAGCATGTAGAGAGAGCTTCAACAGATCCTAAAGCTGTCATAACAACATATGAAGGGAAACATAATCATGATGTGCCAGCAGCTAAGACTAACAGCCACACTATTGCTAACAATAGTGCATCACAGTTAAGATCACAAAATACCATACCTGAGATGCATAGTTTCAGCAGCAGAGGTATTGGGGGCAATGAGCAACAGCCTGTTGCACGTCTAAGGCTGAAGGAAGAGCAGATAACCTAA | 315 | 0.4286 | MMGIDGENMGRKLSKATLILGCNVRKHVERASTDPKAVITTYEGKHNHDVPAAKTNSHTIANNSASQLRSQNTIPEMHSFSSRGIGGNEQQPVARLRLKEEQIT. | 105 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca10g01769 | 104 | SMART | WRKY_cls | 10 | 50 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Seca10g01769 | 104 | MobiDBLite | consensus disorder prediction | 64 | 104 | - | - | |
Seca10g01769 | 104 | MobiDBLite | consensus disorder prediction | 64 | 88 | - | - | |
Seca10g01769 | 104 | ProSiteProfiles | WRKY domain profile. | 1 | 51 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Seca10g01769 | 104 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 21 | 73 | IPR044810 | GO:0003700 | |
Seca10g01769 | 104 | Gene3D | WRKY domain | 3 | 52 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Seca10g01769 | 104 | SUPERFAMILY | WRKY DNA-binding domain | 20 | 51 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Seca10g01769 | 104 | Pfam | WRKY DNA -binding domain | 15 | 49 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca10g01769 | Seca-Chr10 | 19607057 | 19607816 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca10g01769 | 4 | 104 | WRKY Transcription Factor Family | AT2G03340 | 57.426 | 2.93e-27 | 102 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Seca10g01769 | WRKY | 8.3e-08 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca10g01769 | - | - | gmx:100799335 | 154.836 |