Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01731 ATGGGTCTGCAAAACATGCAAAATCAAAGTATGCATTTTGTTCTGTCCACTGATGCCAAACCAAGGCTAAAATGGACTCCTGAGCTTCACCAACGATTCATTGAAGCAACTAATCAGCTTGGAGGTGCAGAAAGTGAAGGCAACCCCAAAGAGTCTTATGAGGGTGATGGGGATTCCAGGACTTACTTTGTACCACCTGAAGAGCCATTTACAGGCATTCCCCTTTTGAGTTGTAACTTTTCATGTTTCTTGTTACAGAAATATAGACTTGGGAAAAGCCAACACCTAGAAACCTGTTCTGACATCAAACAAGAAGAATACACAGAAACCAAGAGCAGTGATGGTCATTGCAGCAGGGAAATCAGTCTTGGGGCCCAGAATCAAATCAATGAAAACTTGCAGATAGCTCAGGCTCTCCAAATGCAAATGGAAGTACAGAAGAAACTTTATGAACAAATTGAGGTGCAGAAACATTTGCAGCTTAGAATTGAAGCTCAAAGGAAGTACTTACAATCAGTACTAAAGAAAGCACAGGAAGCACTTGCTGGATACAATTCTTCCCCAGTTGGTATAGAACTCACAAAAGCTGAACTTTCTCAGCTAGTTACCATGATCAACAATGCTTGCCCAGGCTCTCCAATCTCAGAACTGACAGAAACAAAAGGATGGAGTTTGAACTGTGGGGAGAGGAAAAGAGACAGAGGAACTATGTGTTCACTGGAAAGTTCTTTGACATCTTCTGAAAGCTGTGGAAGAAAGGAAGAGAAACAACCAATGGAAGAAATAGGGGAGTTCAAAAACTCCAAGACTATTTCACTTGAATTGCCATTTATGGCCATGCACCCTGAAGATAAAGCATCCAATGGAGATTCAAGTAATGGGAGAAAGAGAAATGCAGCAATTAAATCTGATGATAACTGTGTTGAGCAACCATCTGGGAAAAGATGTGGGAACAAGTTGAGGAAACCCATGTTGTCAGAAATGCTTGACTTGAACAGCAAATGTCAGAGTGACATGGACTCAACAAGTTCAAAAACATTAGACTTAAATTGCAGTTTAAACTTTTGGGAACCATGA 1077 0.4076 MGLQNMQNQSMHFVLSTDAKPRLKWTPELHQRFIEATNQLGGAESEGNPKESYEGDGDSRTYFVPPEEPFTGIPLLSCNFSCFLLQKYRLGKSQHLETCSDIKQEEYTETKSSDGHCSREISLGAQNQINENLQIAQALQMQMEVQKKLYEQIEVQKHLQLRIEAQRKYLQSVLKKAQEALAGYNSSPVGIELTKAELSQLVTMINNACPGSPISELTETKGWSLNCGERKRDRGTMCSLESSLTSSESCGRKEEKQPMEEIGEFKNSKTISLELPFMAMHPEDKASNGDSSNGRKRNAAIKSDDNCVEQPSGKRCGNKLRKPMLSEMLDLNSKCQSDMDSTSSKTLDLNCSLNFWEP. 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01731 358 Gene3D - 19 69 - -
Seca10g01731 358 MobiDBLite consensus disorder prediction 282 319 - -
Seca10g01731 358 MobiDBLite consensus disorder prediction 38 64 - -
Seca10g01731 358 Coils Coil 136 156 - -
Seca10g01731 358 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 5 44 IPR044848 GO:0003700
Seca10g01731 358 Pfam MYB-CC type transfactor, LHEQLE motif 133 179 IPR025756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01731 Seca-Chr10 19105866 19107815 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g01731 11 316 G2-like Transcription Factor Family AT1G69580 42.767 1.30e-53 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01731 - - gmx:100787178 494.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g01731 10 19105866 19107815 Seca10g01731 10 19105866 19107815 ECH