Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01722 ATGGAGAGCCAAAGCCAACTCCAAGTTCCAGAATATTTAGGACGACAAGGAACCTCCTTTCTCAAAACCTATTTCAATGGACTCAACGCCTTGTTAGGTCTTGGAATACTTTCTGTACCGTATGCCCTATCTCAAGGGGGATGGTTGAGTTTAATGTTGCTCATTTTTGTGGCTATTAGTTGTTGGTACACAGGGTTACTTCTCCAAAGGTGTATGAATAAGCATCCACAAATCAAGTCCTACTCTGACATAGGTAACGTTGCTTTTGGCTACAAAGGAAGAGTTGTGGTAGCTATTTTCATGTATTTAGATCTCTATTTAGTTGCTGTAGAGCTTCTTACACTAGGAGGTGACAGTTTACAATACATGTTTCCAAACATGAACTTCAAAATTGCTACTCTTAGCATTAAAGGTGATATAGGTTTTATTTTGCTTACTGCTTTGGCAATATTGCCAACAACATGGTTGAGAAGTTTGGGAGCTCTGGCCTACATTTCTGCTAGTGGGGCATTGGTTTATCTAATTTTGATGTGGTGTGTTCTATGGGCGGGTGCAGTTGATGGTGTGGGGTTTTATGAAAAAGGCCAGCTAATGAATTTGAGAGGATTTCCTGCTGCTTTAAGCCTCTTTAATTTCTGTTACAGTGCTCATGCTGTCTTCCCCACTCTCAGCTATTCCATGAGAGATAAGAGACAATTTGACAAGGTTTTACTATTTTGCTTTGTAACAAGCACCACAGGCTATGGGTTGATGTCAATTATAGGTTACTTGATGTTTGGAAATTATTCCAAGTCTCAAGTGATCTTAAATCTTCCAATGAATAAAATAAACACCCATATAGCTATTTATACTTCATTATTCGTCCCCTTCACCAAGTATGCAATTATGGTCACTCCTATTGCTATTGCCATTGAGGACAAGTTGCGTTCCAACAGCAGATTTTCTAGTGTTCTCATTAGAACAATGATTGTGGTCAGTACTACGCTTGTCGCGATACTTGTTCCCTATTTTGGGTATGTTATGATGCTTATTGGTGCTTTATCAGGTGTTGCAATGGCATTGTTGTTGCCTTGCTTGTGTTACCTAAAAATAAATGTAGCTGCAAGAAAATTTGGGTTAGAGTTTATGGCCATTGTGGTAATTATATTAGCAGGATCACTCATTTGTGTATTTGGCTCTTATATTTCCATAAGTAAGATAGTGTGTCAATGGAAAAAGAGAAAAGTTCATTAA 1233 0.3828 MESQSQLQVPEYLGRQGTSFLKTYFNGLNALLGLGILSVPYALSQGGWLSLMLLIFVAISCWYTGLLLQRCMNKHPQIKSYSDIGNVAFGYKGRVVVAIFMYLDLYLVAVELLTLGGDSLQYMFPNMNFKIATLSIKGDIGFILLTALAILPTTWLRSLGALAYISASGALVYLILMWCVLWAGAVDGVGFYEKGQLMNLRGFPAALSLFNFCYSAHAVFPTLSYSMRDKRQFDKVLLFCFVTSTTGYGLMSIIGYLMFGNYSKSQVILNLPMNKINTHIAIYTSLFVPFTKYAIMVTPIAIAIEDKLRSNSRFSSVLIRTMIVVSTTLVAILVPYFGYVMMLIGALSGVAMALLLPCLCYLKINVAARKFGLEFMAIVVIILAGSLICVFGSYISISKIVCQWKKRKVH. 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01722 410 PANTHER OS05G0424000 PROTEIN-RELATED 27 387 - -
Seca10g01722 410 Pfam Transmembrane amino acid transporter protein 17 397 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01722 Seca-Chr10 19000296 19003350 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g01722 1 401 Amino Acid or Auxin Permease AAAP Family AT3G28960 44.554 2.77e-119 351
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01722 K15015 - pvy:116132859 501.901