Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01721 ATGACGAAGCTCCAAATCCGTTCCACTAACCTCTTCGCTCGCAACCCCAACAACAACGCTTCTAGGTCTCCCTGCTCCAACAACACCTTCCTCGCCCCCATTCTCTTCTCCCTCCTCCTCTTCCTCTCCTACTATGTATTCTTCTCCTCATCTTCGGGGAGCAGCTTCAGATACCGGATCATCGTCGACGGTGGCAGCACCGGGACCAGGGTGCACGTCTTCAAGTACGAGGTGCACAGGGTGTTCAATTTCGGGAAGGAGGGGCTAACGTCGATGAGGGTGAACCCTGGTCTGTCCTCCTTCGCCGAGGATCCGGATGGTGCGGGTCGTTCCCTTTCGGAGCTGGTAGAGTTCTCGAAGGGTCAGATCCCGAGGGAGAGTTGGAGTGACACGGAGATTCGGCTCATGGCCACGGCTGGATTGAGGATGCTGGATGCGGAGGTGCAGGAGAGGATTCTAGAGTCTTGTAGGAGGGTCCTTCGTTCTTCTGGCTTCAAGTTTAGGGACGATTGGGCTTCTGTCATCACAGGTTCTGATGAAGGAGTGTATGCTTGGGTTGTTGCTAATTATGCGCTGGGAACTCTTGGAGGTGATCCTTTGGATACAACTGGGATTATTGAACTTGGTGGTGCTTCTGCTCAGGTGACCTTTGTATCAAGAGAAGCAATGCTGCCTTTGTTCTCACGTGCTGTTAAATTTGGGAATATCACTTACAACCTTTACAGCCACAGTTTTCTTCATTTTGGCCTGAATGCTGCCCATGACTCATGGAGAGAAGCACTTATATCAGGAGATTTTAGCTTGGCTTCTCAATATATTCAGGAGAGATTGCGCATAGATCCTTGTACTCCTACAGGGTACTCTTATAATGTGGTTCCTAGCTCACACAGTGAGAAAAGCCAATATCATTCCACTATCCAAACAAGGGGTAACTTTTCAGAATGCAGATCTGCAACATTGATGCTACTACAAAAAGGGAAAGAATCGTGTTCTTATCCGCATTGTGACATAGGATCAACTTTCATACCTAAGCTCCAGGGGAAATTTTTGGCCACAGAAAATTTCTTTTACACATCAAAGTTTTTTGGATTGGGACCAAGAGCCTATCTATCCAAGTTGATGACTGCTGGGCAAGAATTCTGTGGAGATGATTGGTTGAGGCTGAAGAAAAAATATGTCTCCCATGATGAGGAAGATTTGCTTAGACATTGCTTCTCTTCAGCATACATTGTCGCTCTGCTTCATGACAGTCTTGGAATTGCTCTGGATGATGAGAGGTATTCCTGA 1287 0.4755 MTKLQIRSTNLFARNPNNNASRSPCSNNTFLAPILFSLLLFLSYYVFFSSSSGSSFRYRIIVDGGSTGTRVHVFKYEVHRVFNFGKEGLTSMRVNPGLSSFAEDPDGAGRSLSELVEFSKGQIPRESWSDTEIRLMATAGLRMLDAEVQERILESCRRVLRSSGFKFRDDWASVITGSDEGVYAWVVANYALGTLGGDPLDTTGIIELGGASAQVTFVSREAMLPLFSRAVKFGNITYNLYSHSFLHFGLNAAHDSWREALISGDFSLASQYIQERLRIDPCTPTGYSYNVVPSSHSEKSQYHSTIQTRGNFSECRSATLMLLQKGKESCSYPHCDIGSTFIPKLQGKFLATENFFYTSKFFGLGPRAYLSKLMTAGQEFCGDDWLRLKKKYVSHDEEDLLRHCFSSAYIVALLHDSLGIALDDERYS. 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01721 428 Gene3D Exopolyphosphatase. Domain 2 176 422 - -
Seca10g01721 428 Pfam GDA1/CD39 (nucleoside phosphatase) family 55 420 IPR000407 GO:0016787
Seca10g01721 428 CDD NBD_sugar-kinase_HSP70_actin 60 218 - -
Seca10g01721 428 Gene3D - 57 175 - -
Seca10g01721 428 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 24 423 IPR000407 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01721 Seca-Chr10 18973386 18976977 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g01721 35 420 Nodulin-like Gene Family AT4G19180 27.488 7.32e-41 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01721 K01510 - gmx:100807287 635.18