Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01711 ATGCGATTTGTTTTCGCCATGTTTCCTGCTGTATTTATTCCACACTTGAGGCCTGCAGAGTACAAGAGATCAAGGTTACCTAGAAACCGTAGGACTGTGAACCGGGCATATGGTGGAGTCCTGTCTGGAAGTGCTGTCAGGGAAAGGATTATTCGAGCTTTCTTGGTTGAAGAACAAAAGATTGTTAAAAAGGTCTTGAAGATCCAGAAGACAAAGGAAAAACAGGCTTTGAAGGGATGA 240 0.4333 MRFVFAMFPAVFIPHLRPAEYKRSRLPRNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKTKEKQALKG. 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01711 79 PANTHER 60S RIBOSOMAL PROTEIN L34 13 75 IPR008195 GO:0003735|GO:0005840|GO:0006412
Seca10g01711 79 Gene3D - 10 79 - -
Seca10g01711 79 Pfam Ribosomal protein L34e 13 55 IPR008195 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01711 Seca-Chr10 18870855 18872273 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g01711 13 78 Cytoplasmic Ribosomal Protein Gene Family AT1G69620 90.909 2.87e-36 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01711 K02915 - gmx:100499882 109.383