Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01708 ATGGTAGGGATTTATGGAATCGGTGGAATAGGTAAAACAACAGCTGCATGTGTCGTATACAATTTCATTGCTGATCAATTTGAGAGTCTCTGTTTTCATTCTGATATTAAAGAAAATTCAAGGAAGCATGGGCTTGTACAGCTTCAGGAGACACTTCTTTTTGAATTAGTAGGCGAGAAGGATGTTAAGTTGTGGTGTGTAAATAAAGGAATTCCTATAATTAAAAGTAGGCTCTGTCAGAAAAAAGTTCTTTTGATTTTGGATGATGTTGACAGATTGGAGCAACTAAGAGCACTAGCAGGGTTAAATCATGAAGAAGCCCTTGAATTGTTTAGTTGGAATGCATTCAAAACAATAGCAGTTAATCCTAGTTACATGGACATATCAAAGAGAGTAATAATTTACTCTAATGATGGCCTTCCATTGTCTCTTGAAATAATAGGTTCTGACTTATTTGGTAAAACAGAGTTGGAATGGAAATCAGCATTAGATACTTATGAAATAATTCCTCATGAAAATATTCAGGAAATACTAAGAGTGAGCTATGATGGCTTAAAGGAAGTTGAGAAGGAAGTATTTTTGGACATGGCTTGCTTCTTTAAAGGATACCGACTACGTGATGTCAGAAACATACTGCATAGTGGCCATGGCTTCACTCCATTGAGGTGTTCATTGACAAATCTCTCTTAA 690 0.358 MVGIYGIGGIGKTTAACVVYNFIADQFESLCFHSDIKENSRKHGLVQLQETLLFELVGEKDVKLWCVNKGIPIIKSRLCQKKVLLILDDVDRLEQLRALAGLNHEEALELFSWNAFKTIAVNPSYMDISKRVIIYSNDGLPLSLEIIGSDLFGKTELEWKSALDTYEIIPHENIQEILRVSYDGLKEVEKEVFLDMACFFKGYRLRDVRNILHSGHGFTPLRCSLTNLS. 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01708 229 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 195 IPR027417 -
Seca10g01708 229 Gene3D - 1 122 IPR027417 -
Seca10g01708 229 PRINTS Disease resistance protein signature 77 91 - -
Seca10g01708 229 PRINTS Disease resistance protein signature 1 16 - -
Seca10g01708 229 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 214 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01708 Seca-Chr10 18849173 18849966 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g01708 2 220 WRKY Transcription Factor Family AT5G45050 31.765 2.77e-25 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01708 - - ccaj:109801117 308.145