Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01707 ATGGACGAGAAAACTAGCGAAGTTGTGTTGCTCGGGTCATGGGTAAGCTCTTACTGCACCAGGATTGAGCTAGCCCTTAAACTGAAGGGCATACCATACAAATTCGTGGAGGAAGACCTGAAAAACAAAAGTGATTTACTCCTCCAGAATAACCCTGTCCACAAAAAGATTCCAGTACTCTTGCACAAAGGAAAGCCAATTTGTGAGTCACTCATCATTCTTGAATACATCGATGAGGTCTGGAGCCACAGTCCCAAACTATTGCCAGAGGATCCTTATCAGAGGGCCAAAGTCCGTTTTTGGGCCAACTACCATGACCAGAAAGTAATCTCGCCTGGTATCTACCCCATCCTCCTATCAAAAGGGGAAGAGAGAAAGAAAGCAATTGAAGAGATGGATGAGATGATGAAGGTATTTGAAGAAGGGGTGAAGGAGGGTTTAGATGGGCAATTCCCTTTGTACAAAGGTCAAACATTAGGATTCCTTGACATTGTGGTAGGTGCAGGTTCTTGCAACTATGAAGCATTTCACGAGGCCTGTAACATAGAGGTCACAAACCCCCAAAAGAGCCCCAAGTTTTTCGAGTGGGTGAATTCCATGAAGGAACATCCTCTGATGAAAGAGACACTGCCTCCTCATGACAAGTTGGTCTCCAAGATAAAAGATTTCATCCCCTAA 678 0.4454 MDEKTSEVVLLGSWVSSYCTRIELALKLKGIPYKFVEEDLKNKSDLLLQNNPVHKKIPVLLHKGKPICESLIILEYIDEVWSHSPKLLPEDPYQRAKVRFWANYHDQKVISPGIYPILLSKGEERKKAIEEMDEMMKVFEEGVKEGLDGQFPLYKGQTLGFLDIVVGAGSCNYEAFHEACNIEVTNPQKSPKFFEWVNSMKEHPLMKETLPPHDKLVSKIKDFIP. 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01707 225 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 91 223 IPR010987 -
Seca10g01707 225 CDD GST_N_Tau 8 81 - -
Seca10g01707 225 SUPERFAMILY GST C-terminal domain-like 79 221 IPR036282 -
Seca10g01707 225 SUPERFAMILY Thioredoxin-like 8 108 IPR036249 -
Seca10g01707 225 Gene3D - 88 224 - -
Seca10g01707 225 CDD GST_C_Tau 92 223 IPR045074 GO:0004364|GO:0006749
Seca10g01707 225 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 11 217 IPR045073 -
Seca10g01707 225 SFLD Main.3: Omega- and Tau-like 4 221 IPR045073 -
Seca10g01707 225 SFLD Main (cytGST) 4 221 - -
Seca10g01707 225 Gene3D Glutaredoxin 1 87 - -
Seca10g01707 225 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
Seca10g01707 225 FunFam Tau class glutathione S-transferase 1 89 - -
Seca10g01707 225 Pfam Glutathione S-transferase, N-terminal domain 12 79 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01707 Seca-Chr10 18847419 18848820 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g01707 1 223 Glutathione S-transferase Gene Family AT1G74590 44.248 1.17e-70 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01707 K00799 - vvi:100263691 298.901