Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01661 ATGAAGAATTTCTTGGTTTCTTTATATTGCTTGTTTCCTGCTATCATTGCAGTCATTCTTGTGCTGTTTACTCCAATTCCCAGTGCACAGCTAACAACAAGTGAGAATAGAATTCTTCTCCAAGTTCAGAGGCTTCTTGAATATCCTCAAGTTCTTCAAGAATGGACCAACTTCACCAACTTCTGTTACCTCCCTCCCTCACCTTCCCTCAAGATTGTCTGCTCAAATGGTCATGTAACTGAATTAACTATCATTGGAAACATGAACTCCCCATCTTTTCATAGAACCAAGCCAGTTTCTTGGAATTCAGCTGAGACTCTTTCAGAAAGATTCTCCATTGATTCTTTCTTTACTGTCTTGACAAAGCTTTCAAATATGAAGGTGTTGTCATTGGTGTCCCTTGGTTTGTGGGGTCCTTTACCATCCAAGATTAGTCGGTTCTGGTCACTTGAAGTGCTTAACATTACCTCAAATTTCATTTATGGAGAAATCCCATCATCGATCTCCTCTTTGAAAAATCTCAGGAGTCTAGTTTTGGTTGATAATCTGTTCAATGGGAGTGTCCCTAATCTAAGAAGGCTAGCATCTCTTGAAGAGCTCAATTTGGCTGGTAACAGATTTGGTCCTGAATTCCCTTCAGTGGACAAGAATCTTGTGAAGATTATCTTAAGAAACAATTCTCTAAGATGTCAAATTCCTTCCCAACTCATGCATGTTGATAAACTTCAGCTATTTGACATCTCTTCCAATGCAATATTTGGAAACATCCCATCATTTCTGTTTTCTCTTCCTTTCCTCCAGCACCTAAACTTGGCTGCAAATCAACTAAGTGGTTCCCTTCCTGTGAATATATCTTGTAGTCCTGCTCTAACATTTGTTGATATCTCACACAACCTCCTGATAGGAAAATTACCATCTTGCATTGGTTCAAAGTCCTCAAATCGAACAATATTGTATTCTGGGAATTGTTTGTCAACCAGAAGCTTACATGATCAACATCCATCTTCATATTGCAAGAAAGTGGAGGCCTTAGCGGTTAACCCACAACTTAAAAGACAGAAGAAGGAAATGAAGATACTACTGCGCCTAGTACTTGGTATCACTGGAGGTGTTGTGGGAATTGCAGGACTTCTGGTTCTACTTATTTCTTGCATCTTGAGGAAGTCCAAAGCAGAAAGAGCTGATAGTAACATAGACAGATGTGTTGATTATATTGATGATAAAGTTTCTGTCCGTGCATATCCAAAACCAAATAATAATGCAAGACATGTTCCTCAGTTAATGAGGTTTGCTACACTTGGATTACCACCATACAGCATTTTCACATTAGAAGAAATTGAAGATGCAACTAACAACTTTGACCAATCAAATCTAATAGGAGAAGGATCACAAGGACAGCTATATAAAGGTTGCCTCAGAGATGGTTCAGTGGTCATGGTTAATCTTGTAAAATTAAAGGACAAGAGTTTGGCCAAAAACAGTATTCAGAACTTGAAAGTATTACCTTATTTACGGCACAGGCATTTAGTGAGTGTTCTAGGACACTCTGTCATCACTTATCAGGACCGTCCCCAAACAAGAAGCATAATATTCATTGTATTTGAACACATCACAAACGTGTCATTGAGGGATCATCTTACAGATAGGAGAAAAAAGGAAATGCTGAAGTGGCCACAAAGAATGGCAATCAGCACAGGCATTGCAAGAGGAATCCAGTTCTTACACACAGGAGTTAATCCGGGCATATTTGGCAACAATATAAAGATTGAGAACATTCTGTTGGATAATAGTCTCAATGCAAAAATTACTGGATACAGCATTCCATTGCCATCCAAGAAAGGTCTTGACAGAAAACTTAATGAACAAAGTGTCCCCAATCATATTGGCAGCATCAATATTGCAGAAAAGGAAGACATCTATCAGTTGGGTGTTATTCTACTTGAAGTTATCACTGGCAAACTAATTACATCTTCTAATGATGTAGAGGAGCTGAAGTATGAGCTGGAGAGAGGTTTATCAGAAGCTGCATCACCAATATTAATAGGCACAATCGATCCTTCCCTCCAGGGAACTTACACATATGAATCACTGAAGATTGCAGTTCAGATCACCATCAATTGTCTCAGCAAGGTTTCTAGTAATCGCCCTTCAATAGAGGATGTTCTCTGGAATTTGCAGTACTCCATGCAAGTTCAAGAGGCGAGGACCAGCAGTGGAAACCTCAATTTAAGATTCTAA 2238 0.3896 MKNFLVSLYCLFPAIIAVILVLFTPIPSAQLTTSENRILLQVQRLLEYPQVLQEWTNFTNFCYLPPSPSLKIVCSNGHVTELTIIGNMNSPSFHRTKPVSWNSAETLSERFSIDSFFTVLTKLSNMKVLSLVSLGLWGPLPSKISRFWSLEVLNITSNFIYGEIPSSISSLKNLRSLVLVDNLFNGSVPNLRRLASLEELNLAGNRFGPEFPSVDKNLVKIILRNNSLRCQIPSQLMHVDKLQLFDISSNAIFGNIPSFLFSLPFLQHLNLAANQLSGSLPVNISCSPALTFVDISHNLLIGKLPSCIGSKSSNRTILYSGNCLSTRSLHDQHPSSYCKKVEALAVNPQLKRQKKEMKILLRLVLGITGGVVGIAGLLVLLISCILRKSKAERADSNIDRCVDYIDDKVSVRAYPKPNNNARHVPQLMRFATLGLPPYSIFTLEEIEDATNNFDQSNLIGEGSQGQLYKGCLRDGSVVMVNLVKLKDKSLAKNSIQNLKVLPYLRHRHLVSVLGHSVITYQDRPQTRSIIFIVFEHITNVSLRDHLTDRRKKEMLKWPQRMAISTGIARGIQFLHTGVNPGIFGNNIKIENILLDNSLNAKITGYSIPLPSKKGLDRKLNEQSVPNHIGSINIAEKEDIYQLGVILLEVITGKLITSSNDVEELKYELERGLSEAASPILIGTIDPSLQGTYTYESLKIAVQITINCLSKVSSNRPSIEDVLWNLQYSMQVQEARTSSGNLNLRF. 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01661 745 Gene3D Phosphorylase Kinase; domain 1 420 522 - -
Seca10g01661 745 ProSiteProfiles Protein kinase domain profile. 453 727 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca10g01661 745 Gene3D Ribonuclease Inhibitor 215 360 IPR032675 -
Seca10g01661 745 FunFam Putative LRR receptor-like serine/threonine-protein kinase 216 348 - -
Seca10g01661 745 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 368 740 - -
Seca10g01661 745 SUPERFAMILY Protein kinase-like (PK-like) 434 725 IPR011009 -
Seca10g01661 745 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 537 740 - -
Seca10g01661 745 FunFam Probable LRR receptor-like serine/threonine-protein kinase At2g02780 426 526 - -
Seca10g01661 745 Pfam Protein kinase domain 454 722 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca10g01661 745 SUPERFAMILY L domain-like 114 329 - -
Seca10g01661 745 Gene3D Transferase(Phosphotransferase) domain 1 537 742 - -
Seca10g01661 745 FunFam Probable LRR receptor-like serine/threonine-protein kinase At2g02780 32 215 - -
Seca10g01661 745 Gene3D Ribonuclease Inhibitor 32 214 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01661 Seca-Chr10 18188313 18191804 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g01661 29 668 Miscellaneous Gene Families AT2G02780 48.949 0.0 548
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Seca10g01661 Pkinase 1.4e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01661 - - gmx:100800018 1041.18