Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01657 ATGGCAGATCATGACAACTTCCCGGATTTTAACGGTGATGAAGAGATTGGTAGCAAGAAGGATCAAAAGGTCGAATCAGCTAAGGGGGAAAGGGGAGAAGTTAGAGAAGAAAATGAAAGGTTGAAGTTCTTATTGGGGCAGCTTGTAAATGATTATCAATCACTGCAAATGAAGCTTCAACAAACAAAAGAGGACACAAAAACCACTCATCACCATGAAGAAAATGAAGAAAGTGAACTTGTCTGCCTTTCTCTTGGGATATCATCTACCTCCCAAGGCCAACATAGGATGGATATGAAAAAGAATAATAGCAATACAACAACTGAAAAGAGAGAAAATGAAGAAGAAGAAGAAGATAAAGGACTTGCACTTGGGTTAGATATGATCAGATTTGACCCTGCTGCTGCAGTAGTATCTGATCAAATTGAAGCTGCAAATAATCTCAGCCCAGAAAGTAGCCTTGATGGCAAAGGGAAGGAGGCTGAGGAACCAACTGAGATGTGGCCACCCAGTAAAGTTTTGAAGACAATCAAAATTGGGGATAAAAGTGAAGTTTCTCAACACAGTACTACTCAACTCAAGAAGGCTGCTAGGGTTTCTATTAGAGCCAGATGTGACTCTCAAACGATGAATGATGGGTGCCAATGGAGAAAATATGGACAGAAAATAGCAAAAGGAAATCCATGCCCGCGTGCTTACTATCGATGCACTGTCTCTCCATCTTGTCCTGTAAGAAAACAGGTGCAAAGATGTGCTGAGGATATGTCCATATTGATTACCACCTATGAAGGAATCCACAATCACCCACTTCCTCTTTCAGCCACTGCTATGGCCTCAACAACTTGTGCAGCTGCTTCCATGCTTCAATCTCCTTCATTGATGAGTTCACAACAAGGAATAACCAATTCAGATAATATTATTAATTCCAGTGCTGCTCACACCCCTAATGCTCTAAACTTCTCAACATACCAAATTTCAAGACCACATCCATTAATCCACCTTCCCAACTCTTGTATTTCAACCTTAAATTCTCACCCCACAATCACTCTGGACCTAACTGCATCACCAACTCCCACTCATTCTGGAAATTTCACCTCAGGCTTCTCATACACACCAAAGTATTCATCAACAAACCTTAATTTTTCCACTTCCTCATCATCAGGTTTCTGTCCTCTACAATCTAGCATGCCACAATCACCTTGGAGCAGTTATAGTGGCAGTTACTTCAACTCTGGAACTGCAACACTAGCCCAAATTAGAAACCAAGGTGGTCACACTTACATGTTAAACACTGGAAAACAACCATCTCAGGGGGTTATCCACAATTCCAATTATATGAGTAACCATAGCATTTCTCAACAGTCTCTGCCAGATTCCATAGTTGCTGCAACCAAGGCAATTACAACCAACCCAAAATTTCAATCAGCATTAGTGAATGCTCTGACAACATATGTTGGCAATGGAGGTGGTGGTAGTAGCACTAGCAATAGCTTAATAGAAAATCATCATGTTGTTGAGAGTGCAGCAGCATTGAAATTAAAGGAAAACATTTCTAACCAAAATAACAGAGGAACATGTTCACCATCATCATCAGGGTACTTGATGAATATGTCTTCCTCTGCTCTTAACTCTCAACAAGGAAACTTGATTAATGCATTCTCACCACCACCACCACCAGCAGTGTCTAAAAGTGCCTCTGGCTCGTCTTCTAATAGAAGTAGCTAG 1725 0.4093 MADHDNFPDFNGDEEIGSKKDQKVESAKGERGEVREENERLKFLLGQLVNDYQSLQMKLQQTKEDTKTTHHHEENEESELVCLSLGISSTSQGQHRMDMKKNNSNTTTEKRENEEEEEDKGLALGLDMIRFDPAAAVVSDQIEAANNLSPESSLDGKGKEAEEPTEMWPPSKVLKTIKIGDKSEVSQHSTTQLKKAARVSIRARCDSQTMNDGCQWRKYGQKIAKGNPCPRAYYRCTVSPSCPVRKQVQRCAEDMSILITTYEGIHNHPLPLSATAMASTTCAAASMLQSPSLMSSQQGITNSDNIINSSAAHTPNALNFSTYQISRPHPLIHLPNSCISTLNSHPTITLDLTASPTPTHSGNFTSGFSYTPKYSSTNLNFSTSSSSGFCPLQSSMPQSPWSSYSGSYFNSGTATLAQIRNQGGHTYMLNTGKQPSQGVIHNSNYMSNHSISQQSLPDSIVAATKAITTNPKFQSALVNALTTYVGNGGGGSSTSNSLIENHHVVESAAALKLKENISNQNNRGTCSPSSSGYLMNMSSSALNSQQGNLINAFSPPPPPAVSKSASGSSSNRSS. 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01657 574 MobiDBLite consensus disorder prediction 1 37 - -
Seca10g01657 574 Coils Coil 97 117 - -
Seca10g01657 574 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 19 499 IPR044810 GO:0003700
Seca10g01657 574 SUPERFAMILY WRKY DNA-binding domain 204 271 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca10g01657 574 Coils Coil 45 65 - -
Seca10g01657 574 MobiDBLite consensus disorder prediction 59 120 - -
Seca10g01657 574 Gene3D WRKY domain 195 272 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca10g01657 574 MobiDBLite consensus disorder prediction 82 101 - -
Seca10g01657 574 MobiDBLite consensus disorder prediction 148 167 - -
Seca10g01657 574 MobiDBLite consensus disorder prediction 547 574 - -
Seca10g01657 574 MobiDBLite consensus disorder prediction 102 120 - -
Seca10g01657 574 MobiDBLite consensus disorder prediction 63 79 - -
Seca10g01657 574 Pfam WRKY DNA -binding domain 211 269 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca10g01657 574 SMART WRKY_cls 210 270 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca10g01657 574 ProSiteProfiles WRKY domain profile. 205 271 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca10g01657 574 FunFam probable WRKY transcription factor 31 194 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01657 Seca-Chr10 18170541 18174876 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g01657 33 489 WRKY Transcription Factor Family AT5G15130 36.492 1.59e-61 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Seca10g01657 WRKY 8e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01657 - - lang:109339108 483.411