Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca10g01653 | ATGTCAAGGGATTCACTTGTTTTATCAGGGGCTTACAATAATGAAGAAGTTGCTCCAAGAGCTTATGATTTGGTTGCGGTCAAGTACTGGGGAACATCAACTTTCACAAAATTTCCCGTATCTGATTATGAGAAAGAAATTAAGATTATGATAACTGTAACAAAAGAAGAATATCTTGCTTCATTAAGAAGGAGAAGCAGTGGTTTTTCCAGAGGTGTATCAAAGTATAGAGGAGTGGCAAGGCCCCATCACAACGGAAAATGGAAGGCAAGGATAGGAAGAGTGTTTGGCAACAAGTACCTCTACCTTGGGACATACAGTACACAAGAAGAGGCAGCTCGGGCATATGATATTGCAGCAATTGAACACAGAGGGATAAATGCAGTGACAAACTCTGACCTAAGGACTTATATCAGAAGCCTAAGACCAAGTGCTCATTCTACTGCTTCTCAAAATCAAAAGCCAAGTATAGATAACCAGCCCTTTACAACACCTAACCTTATCCAAACTAGAGAAACCACTAAGGTGTCCAATTTCAACTTCCATCCATTCCCTGGAGGTGAATTGGACAACAACAAAAAGCAAGAAATTTCCCAGTATATGACCCCTTTAAGTCGTGGCAATAAATCAGCTTCCTCAACAGCATTAGGACTTCTCCTAAAATCCTCAGTATTCAGAGAACTGGTGCAGAGAAATCTGAATTTTGTAAATGAAGAAACTGAAATGAAAAACACACAAGAAGGCACTGATGATGGAGTACGAGTACCTCTTACATATGCTATTCCAATAGCAACAGCTTACCTAACTTGGAGTCGCCAGAAGAGAGCACATTGCCACTGTATCACAGTTCCCTGCAATTCCCCCATGGAACGGTACTTTAAAAGTTTCTGA | 891 | 0.4052 | MSRDSLVLSGAYNNEEVAPRAYDLVAVKYWGTSTFTKFPVSDYEKEIKIMITVTKEEYLASLRRRSSGFSRGVSKYRGVARPHHNGKWKARIGRVFGNKYLYLGTYSTQEEAARAYDIAAIEHRGINAVTNSDLRTYIRSLRPSAHSTASQNQKPSIDNQPFTTPNLIQTRETTKVSNFNFHPFPGGELDNNKKQEISQYMTPLSRGNKSASSTALGLLLKSSVFRELVQRNLNFVNEETEMKNTQEGTDDGVRVPLTYAIPIATAYLTWSRQKRAHCHCITVPCNSPMERYFKSF. | 297 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca10g01653 | 296 | Gene3D | AP2/ERF domain | 74 | 134 | IPR036955 | GO:0003700|GO:0006355 | |
Seca10g01653 | 296 | Gene3D | AP2/ERF domain | 2 | 41 | IPR036955 | GO:0003700|GO:0006355 | |
Seca10g01653 | 296 | ProSiteProfiles | AP2/ERF domain profile. | 75 | 133 | IPR001471 | GO:0003700|GO:0006355 | |
Seca10g01653 | 296 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR | 8 | 198 | - | - | |
Seca10g01653 | 296 | SMART | rav1_2 | 75 | 139 | IPR001471 | GO:0003700|GO:0006355 | |
Seca10g01653 | 296 | CDD | AP2 | 74 | 131 | IPR001471 | GO:0003700|GO:0006355 | |
Seca10g01653 | 296 | SUPERFAMILY | DNA-binding domain | 74 | 131 | IPR016177 | GO:0003677 | |
Seca10g01653 | 296 | MobiDBLite | consensus disorder prediction | 143 | 164 | - | - | |
Seca10g01653 | 296 | Pfam | AP2 domain | 74 | 123 | IPR001471 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca10g01653 | Seca-Chr10 | 18144484 | 18145805 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca10g01653 | 5 | 175 | AP2-EREBP Transcription Factor Family | AT3G54320 | 59.649 | 6.63e-57 | 185 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2 or ERF-ERF | Seca10g01653 | AP2 | 4.9e-09 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca10g01653 | - | - | gmx:100798483 | 357.066 |