Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01641 ATGTTGAACTTACAGGAGGGTGGTGAAGCTGCTGCTGAAGAAACTAAGAAAAGTAATCATGTTCAGAGAAAACTTGAGAAGCGCCAGAAAGATCGTAAGCTTGATCCTCACATTGAAGAGCAGTTTGGTGGTGGTCGATTGCTGGCCTGTATTTCTTCTCGCCCTGGTCAATGTGGTCGGGCTGATGGGTACATTCTGGAAGGTAAGGAACTGGAATTTTACATGAAGAAACTACAGAAGAAGAAGGGAAAGGGTGCTGCTTAA 264 0.447 MLNLQEGGEAAAEETKKSNHVQRKLEKRQKDRKLDPHIEEQFGGGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQKKKGKGAA. 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01641 87 MobiDBLite consensus disorder prediction 10 38 - -
Seca10g01641 87 FunFam 40S ribosomal protein S8 31 84 - -
Seca10g01641 87 PANTHER 40S RIBOSOMAL PROTEIN S8 9 84 IPR001047 GO:0003735|GO:0005840|GO:0006412
Seca10g01641 87 MobiDBLite consensus disorder prediction 1 38 - -
Seca10g01641 87 Pfam Ribosomal protein S8e 38 66 IPR022309 -
Seca10g01641 87 Gene3D - 2 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01641 Seca-Chr10 17972506 17973108 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g01641 8 75 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 81.159 2.43e-35 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01641 K02995 - gmx:100500112 139.428