Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01640 ATGGAGAAAGAAGAGAAAAGGTATGAGCTTGGTCGCCAGCCAGCAAACACCAAGTTATCAAGCAACAAGACAGTTAGGAGGATTCGTGTTAGGGGTGGCAATGTGAAATGGAGGGCATTGAGGTTGGATACTGGAAATTACTCATGGGGTAGTGAAGCTGTAACTCGCAAAACTCGTATTTTAGATGTGGTTTACAATGCCTCAAACAATGAGCTTGTGCGAACTCAAACTCTGGTCAAGAGTGCTATTGTCCAGGTTGATGCCGCCCCATTCAAACAGTGGTACCTTCATCACTATGGTGTTGATATTGGTAGAAAAAAGAAAGCAGCATCCAAGAAGGACTCTACAGAGGTGATTCTTAATGCTTTGAGAAATTTTTCTTTATTTTTCAATTTCTATCCTGTGATATATCTCTATGCTTCCATTTATTTCTTAAAAAATAGCTCTTGTACTTAA 456 0.3969 MEKEEKRYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLHHYGVDIGRKKKAASKKDSTEVILNALRNFSLFFNFYPVIYLYASIYFLKNSSCT. 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01640 151 CDD Ribosomal_S8e_like 6 105 - -
Seca10g01640 151 NCBIfam ribosomal protein eS8 3 89 IPR001047 GO:0003735|GO:0005840|GO:0006412
Seca10g01640 151 Pfam Ribosomal protein S8e 4 92 IPR022309 -
Seca10g01640 151 PANTHER 40S RIBOSOMAL PROTEIN S8 4 115 IPR001047 GO:0003735|GO:0005840|GO:0006412
Seca10g01640 151 FunFam 40S ribosomal protein S8 13 125 - -
Seca10g01640 151 Gene3D - 13 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01640 Seca-Chr10 17970439 17972181 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g01640 1 111 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 88.288 1.01e-68 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01640 K02995 - vvi:100854440 219.164