Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01598 ATGGTTTACGACTACGTTTACATGCATTTCGTCGTCACTGTCTTCTCGGCCGCTTTGGTTTCTCAGGGTTTAGCATTTACTGATCCCTATGATGTCGTAACTCTCCAAGATCTATACAAGACCTTAAACTCCCCATCAATGCTCCAAGGCTGTAATGTTATGCACCTCAAAATTCAAGGATTGAACCTCACAGGAGATCTTGGAGGCTTGCTCTATAATCTACAGAATTTGAAGCAACTTGATGTCAGTTCAAACAACATAGTGGGTGAAATACCATACAGTTTACCCCCCAATGCCACACATATAAATATGGCTTGCAACTACTTAAGGTCCTCAGCACCTCGGAAGTCGGACTGCGTTCCTTGCACCTCAGACTTCTTTCCTTCACATCTCAGATTCAAGAGGCCTTCAACATATCAGATTCATTCCTCGGCCCAAGTCGGACTTAGTTACTCGACTCGTTATCGGATTAATTCCTTGATTTAA 486 0.43 MVYDYVYMHFVVTVFSAALVSQGLAFTDPYDVVTLQDLYKTLNSPSMLQGCNVMHLKIQGLNLTGDLGGLLYNLQNLKQLDVSSNNIVGEIPYSLPPNATHINMACNYLRSSAPRKSDCVPCTSDFFPSHLRFKRPSTYQIHSSAQVGLSYSTRYRINSLI. 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01598 161 Gene3D Ribonuclease Inhibitor 24 142 IPR032675 -
Seca10g01598 161 SUPERFAMILY L domain-like 48 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01598 Seca-Chr10 17576948 17577487 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g01598 27 114 Strubbelig Receptor Gene Family AT5G06820 46.296 2.04e-22 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01598 - - psat:127083003 138.658