Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01557 ATGCGAATTCCAAATGCATTCTCTTCCCTAGTTAGCCCTAGAAGCTTCACGTCTCTAGTTAATCTAATGTGCACGGTGAATCCAAAATTTATACTTCATGATTTCGAAACTGTGACGGAGCTGTGCACGGCGACGAGGATAAGTCATGTCCTCATGAGTTCGACGGAGCTGTGCGCCGGCGACGAGGATGGGGCGCGACAATCGAGACGAGCATGGCCAGCGGCGAGAGCCGCAACGACACATCTCTGTCTTCTCTCGTTCTTCTTCTCCGGTCACGGCGATGGGAGAAAGCCCGAGGCGACGGTTGTGCCACCAGAGCAAGCTCGAAAAATTTACCAGGCTCTGAAGGAAAAAGGTGTGCCGGTTGCCCTTATGGAGTATGAAGGAGAACAACATGGTTTCCGAAAGGCTGAGAACATTAAGTTCACACTTGAACAATCAATGGTCTTCTTTGCGCGATTGATTGGGAATTTCAATGTTGCTGATGATATTACTCCCATCAAACTTGACAACTTTGATTGA 522 0.4866 MRIPNAFSSLVSPRSFTSLVNLMCTVNPKFILHDFETVTELCTATRISHVLMSSTELCAGDEDGARQSRRAWPAARAATTHLCLLSFFFSGHGDGRKPEATVVPPEQARKIYQALKEKGVPVALMEYEGEQHGFRKAENIKFTLEQSMVFFARLIGNFNVADDITPIKLDNFD. 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01557 173 Pfam Prolyl oligopeptidase family 102 156 IPR001375 GO:0006508|GO:0008236
Seca10g01557 173 Gene3D alpha/beta hydrolase 34 161 IPR029058 -
Seca10g01557 173 PANTHER PEPTIDASE S9 PROLYL OLIGOPEPTIDASE 99 168 - -
Seca10g01557 173 SUPERFAMILY alpha/beta-Hydrolases 101 154 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01557 Seca-Chr10 16969167 16970056 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g01557 99 173 Carbohydrate Esterase AT5G36210 77.333 2.16e-36 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01557 - - vum:124848396 141.739