Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01552 ATGGGTGAGGACGATGAAATAACATCAGAAAATAATAGTCTTGCATGTATACAAAGTGAAGAACCTTATACCCCACATGATGTCGATACTTCATTAACAGAATGTGATATAGTTTTTGAACCACAAGAGGGAATGTCATTCAAATCTGTGGAGGAATTCAAAGACTTTTACCAAAAATATGCCTTTCAAAAAGGGTTTAGTTTTGTGATAAGAACCTCAAGAAAGAACTCTTCTGGTTGTGTTTGTAACCTTGTATTAGCATGTGCACGCCAAGGACACAGAAAATCAACCGTGAAGAACTCTTTCAAAAGTGTGTCATCAATCAAAGCTGAATGTGGAGCACATGTTACTGCTTGCTTGAAGTCTGATGGGTTGTATTACATAACCAAGGTCATTCTTCATCATTCTCATGATCTAAGCCCAAGCAAAGCAAGATTGTTCAAGTCAAACAAAGAGATGAGCATGCATGTAAGGAGAGTCTTGGATGTCAATGATAGGGCAGGGGTGAGATTGAGCAAAAGCTTTAATTCCATTGTGACACATGTAGGGGGCTATGAAAATTTGCCTTGTATTGAGAGAGATACGAGGAATTATATTATAAAGGAAAGGCGAGCAATTGGCAAAGGGGGTGATGGTGAGGCTCTCAAGTGCTATTTTGCTAGGATGCAAGAGCAAAATAGTGACTTTTTCTATGACATTGATTTGGATAATGATTTTCATATTAGAAATGTGTTTTGGGCAGATGCAAGAAGTAGGGCAGCATATGTGTCATTTGGTGATGTGATTACATTTGATACAACTTATCTCACAAATAAGTATGATATGCCATTTGCTGCATTTGTTGGGGTTAATCATCATGGCCAATCGGTACTACTTGGATGTGGGTTGCTATCTAGTGAAGACACTGCAGGATTTGTGTGGTTATTTAGATCATGGTTACGATGCATATGGTGCTTATGGCATATACTGAAGAAATTACCCCAAAAGCTTTCAAGGCATAGTAAATACCTTGCAGTTATTTCTCAATTACAAGCTGCAATTTACGATACATACACACCAGCTGAGTTTGAAGAACAGTGGGAAAAGGTGATTAATAAATATAATTTGCAAGAGAATGATTGGCTTAGGGGTTTGTATGCTGAGCGTCATCGGTGGATACCTATATTCTTGAAACATCATTTTTGGGCAGGAATGTCAACTACACAATGTAGTGAGAGTATTCATGCTTTCTTTGATGGATATGTCCACCATTCAACTACCTTGGAGCAATTTGTTAACCAATATGACAATGCACTTCGAGACAGGGCAGAAAAGGAGTTCCAAGCTGATTTTCAATCTTTAAATAGCAAAGTGTCTTCTAATACAAAGTCTCCAATTGAAAGACAATTTCAAGCAAATTATACTCATAAAAAATTCAAAGAGGTCCAAGCCGAGTTCAGAGGTACAACTGATTGTCATGCATCATTAACACTACAAGAAGGTTGTGTCTGCACTTACAATGTAGTGGAGGACATGATTTTTGGGGATAAACCTAAAGAAGTTGACTTTATTGTGGTGTTTAATAGAGAAAACCATGATATCAAGTGTAAGTTCCTGTTATTTGAATTTCGAGGCATTATGTGTAGGCATTCTCTTGCTGTGCTTGGTATAGAAAGGGTGAAAGAAGTGCCTTCTAAGTATGTGTTATCAAGGTGGAGCAAGAACATGAAAAGAAGACACACATATATTAAGAGTAGATATGATGTTAAGCAATTAAAGCCTCAAATGCAAAGATTTGATGATTTATGTAAGAAATTTTATGAAGTTGGTGAAGTTGTTGCAGAATATGAAGACACGACTACTTTTCTACAAGAGTTGTTACATGAAGCAATGAGCAAATTGAAGGTGATGATTGCATCTAATAAACAGAATCAAATATGCATTGTTCGTCCTACTTGCAATGTGAATGTAATTTGTGACACGCCAACGGTGAGTGAAACCATTCATAGTCCAAAGGCAGTACGTCGTGTAGGTCGCCCTGCTTCAAAAAGGAAAGTCTCAATACTTGAGAAAGCTATCAAAAGTTCGAAGAACAGAAGGAATACGATGAAATCCAATCAAATGCAACAGCAAATGGGTGTAAATGTTGGTGAGGAATGCCATGGTCAAATTGTCTCTACAGATGGTAGCTTTGTTTCATTATTGTCAAGCTTCCAAGGGAGTGGAGTTGGAGCTTTAACAAATTACTTTCCTAAGCCATAG 2241 0.3744 MGEDDEITSENNSLACIQSEEPYTPHDVDTSLTECDIVFEPQEGMSFKSVEEFKDFYQKYAFQKGFSFVIRTSRKNSSGCVCNLVLACARQGHRKSTVKNSFKSVSSIKAECGAHVTACLKSDGLYYITKVILHHSHDLSPSKARLFKSNKEMSMHVRRVLDVNDRAGVRLSKSFNSIVTHVGGYENLPCIERDTRNYIIKERRAIGKGGDGEALKCYFARMQEQNSDFFYDIDLDNDFHIRNVFWADARSRAAYVSFGDVITFDTTYLTNKYDMPFAAFVGVNHHGQSVLLGCGLLSSEDTAGFVWLFRSWLRCIWCLWHILKKLPQKLSRHSKYLAVISQLQAAIYDTYTPAEFEEQWEKVINKYNLQENDWLRGLYAERHRWIPIFLKHHFWAGMSTTQCSESIHAFFDGYVHHSTTLEQFVNQYDNALRDRAEKEFQADFQSLNSKVSSNTKSPIERQFQANYTHKKFKEVQAEFRGTTDCHASLTLQEGCVCTYNVVEDMIFGDKPKEVDFIVVFNRENHDIKCKFLLFEFRGIMCRHSLAVLGIERVKEVPSKYVLSRWSKNMKRRHTYIKSRYDVKQLKPQMQRFDDLCKKFYEVGEVVAEYEDTTTFLQELLHEAMSKLKVMIASNKQNQICIVRPTCNVNVICDTPTVSETIHSPKAVRRVGRPASKRKVSILEKAIKSSKNRRNTMKSNQMQQQMGVNVGEECHGQIVSTDGSFVSLLSSFQGSGVGALTNYFPKP. 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01552 746 Pfam FAR1 DNA-binding domain 55 140 IPR004330 -
Seca10g01552 746 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 33 628 IPR031052 GO:0006355
Seca10g01552 746 Pfam MULE transposase domain 261 315 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01552 Seca-Chr10 16889838 16892273 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca10g01552 FAR1 9.3e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01552 - - psat:127087122 758.829