Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01516 ATGGCTGCAACTCTTTCACTCTCCTTCCCCTTAGACCCTCAAAATCGCTTTTTCCCCGCCACCACTCTCTCCAAAACGCGCCCTTTCACTCTCCCAACTTCTCCCCTCAAATACCCACTTCCCAATTTCTCCTCTCGCTCCTTCAAAATCTCATCTTCCCACTCCCCCTCTTCCCTCACGCTCCACGACCCGTTTCGCCCGGGTCGGCTCCTCACCAACGATGAGCTCCACAGGCTCGAATTCCTCGAGGGTTTCCTCTATTCCCACGAACTCGAATCCGGGTCCCTCTGGGTTCGGGTCATGAGGTCCCACGAGGTGGACACCACTGTCGGCTTGCTCGCTGAGTCCTTCGCCGAGTCCATGCTGTTGCCGGCGGGTTACGTCAACTTGTTGGGGTTCTTGGTGAAGCAGTATTTGGTTGAACGGAGGACGCTGATGCCCCACATGGCCACGCTCATTGGGTTTTACAGAGGAACGGTGGATGGTGAAGAACGTGGAGAAGAGCAAGAATTGCAGTTGGCAGGGACTGTGGAGATTTGTTTTGACAAAAAGGGTGCCAATGCTTCTGTCCCTTCACCCACACCTCCCAAGGATTCGCCTTACATTTGTAACATGGCCGTGCAAAAGTCTCTCAGGAGGAGGGGCATTGGCTGGCATCTTTTAAAGGCAAGCGAGGAACTAATTTCTCAGATGAGTTCTTCAAGAGAGGTTTACTTGCATTGCAGAATGATTGATGCAGCTCCATTTAACATGTATACAAAAGCAGACTACAAAATTGTAAAGACAGATAGTATTTTAGTCCTGCTGATGTTGCAGAGACGCAAGCACTTGATGTGCAAGAAACTTCCTCTCTTAAGTACACCTTCAGAAACAGATCTGTCAGGTTCTGACAAGTAA 897 0.5039 MAATLSLSFPLDPQNRFFPATTLSKTRPFTLPTSPLKYPLPNFSSRSFKISSSHSPSSLTLHDPFRPGRLLTNDELHRLEFLEGFLYSHELESGSLWVRVMRSHEVDTTVGLLAESFAESMLLPAGYVNLLGFLVKQYLVERRTLMPHMATLIGFYRGTVDGEERGEEQELQLAGTVEICFDKKGANASVPSPTPPKDSPYICNMAVQKSLRRRGIGWHLLKASEELISQMSSSREVYLHCRMIDAAPFNMYTKADYKIVKTDSILVLLMLQRRKHLMCKKLPLLSTPSETDLSGSDK. 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01516 298 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 9 297 - -
Seca10g01516 298 Gene3D - 149 283 - -
Seca10g01516 298 CDD NAT_SF 168 240 - -
Seca10g01516 298 Pfam Acetyltransferase (GNAT) family 172 255 IPR000182 GO:0016747
Seca10g01516 298 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 172 263 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01516 Seca-Chr10 16429414 16436623 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Seca10g01516 Acetyltransf_1 1.4e-05 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01516 - - lja:Lj2g3v1378720.1 444.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g01516 10 16429414 16436623 Seca10g01516 10 16429414 16436623 ECH