Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01514 ATGTCTGCAGCATTGGTGAGAATTGTTGTTCCGCTATCACTGCTTGCATTGCTTGTAGCTGTAACTGAAGCAGGCCTTCTACCGCACAAAGTGCATGAGGTAGTCATAAATAATTTGCCAAATAACAAAACTCTGATCCTTCATTGCTACAAAAGGAAAGGTAAAGATCTTGGAGTGACAGTCCTCCGTTCTGGTGCGACCTTCGAATTTACTTTCAGGCCAAGGCTTATTGGCTCCACAAAGTACTATTGCAGCTTCCAATGGAGAGGTGTCTTTTACTGGTTTGACTTATACACCAAACACAGGGATCATAAGAAATGCAAGAACTGCAGTTGGAGTGTCAGAGAGGAAGCCATCTGTAGGTTCAACTATAACACTCATGCCTTTAGTGATTGTTATTACTGGAAGAAAATCTGA 417 0.4197 MSAALVRIVVPLSLLALLVAVTEAGLLPHKVHEVVINNLPNNKTLILHCYKRKGKDLGVTVLRSGATFEFTFRPRLIGSTKYYCSFQWRGVFYWFDLYTKHRDHKKCKNCSWSVREEAICRFNYNTHAFSDCYYWKKI. 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01514 138 PANTHER - 28 125 IPR010264 -
Seca10g01514 138 Pfam Plant self-incompatibility protein S1 34 135 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01514 Seca-Chr10 16417012 16417428 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g01514 6 135 Carbohydrate Esterase AT3G16970 29.104 7.57e-21 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01514 - - psat:127123072 148.288