Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01513 ATGGAAATAGTATATTGGAGACGTTTTAGCAGCCAAGCTAAAATTTTAGGAACAATAGTATCAGTTACTGGAGCATTTGTTGTGATATTCTACAAGGGCCCACCAATCTTCAAGACACATTCTAACAAACTTCAATTTTCACCACAATTGAACTGGATCTTGGGAGGGTTGTTCCTTGCTGGCGATTCTTTGCTTTGTTCCATGTGGTACATATATCAGGCTTCAGTTACAAGGAAATACCCTGTTGTAACAATCATAGTCTTCTTCCAAATCTTATTTACAACCATTCAGTCGGCAGTATTTGCCTTAATTGTAGTTAGAGATCCAAGCGCATGGCAGCTAAAGCTTGATATGGGGTTGATTGCCATTTTATACCAGGCAATAGCTGCAACAGTGATACGCTATATGCTAACCACATGGTGCGTCCAAAAAGCCGGTCCTCTGTTTTGTGCTATGTTCAAGCCAGTTGGGATCATCTTCACCGTCTTCATGGGTGCAATTTTTCTCGGGGATGATCTTAATCTTGGAAGTTTGATTGGTGCGGTTATAATAGTGGTAGGATTTTATGCTGTGTTGTGGGGAAAAGCCAAAGAAGAGGACAAGATTGAGAGGTTGGAGTCGTCATGCCATAGTGTTCCTCTGTTACAAAACAAGGCATAA 660 0.4091 MEIVYWRRFSSQAKILGTIVSVTGAFVVIFYKGPPIFKTHSNKLQFSPQLNWILGGLFLAGDSLLCSMWYIYQASVTRKYPVVTIIVFFQILFTTIQSAVFALIVVRDPSAWQLKLDMGLIAILYQAIAATVIRYMLTTWCVQKAGPLFCAMFKPVGIIFTVFMGAIFLGDDLNLGSLIGAVIIVVGFYAVLWGKAKEEDKIERLESSCHSVPLLQNKA. 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01513 219 PANTHER WAT1-RELATED PROTEIN 1 203 IPR030184 GO:0016020|GO:0022857
Seca10g01513 219 SUPERFAMILY Multidrug resistance efflux transporter EmrE 116 197 - -
Seca10g01513 219 Pfam EamA-like transporter family 56 192 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01513 Seca-Chr10 16408151 16411843 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g01513 1 218 Nodulin-like Gene Family AT3G28070 41.667 1.85e-50 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01513 - - gmx:100792109 346.665